DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and CRB2

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_775960.4 Gene:CRB2 / 286204 HGNCID:18688 Length:1285 Species:Homo sapiens


Alignment Length:1594 Identity:376/1594 - (23%)
Similarity:505/1594 - (31%) Gaps:552/1594 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 CTHGACLNGV-CHCNDGYGGCNCVDKDENECKQRPCDVFAHCT----NTLGSFTCTCFPGYRGNG 163
            |....|..|. |...:. ||..|...:...|..:||...|.|.    :..| |.|.|.||::|. 
Human    42 CASDPCAPGTECQATES-GGYTCGPMEPRGCATQPCHHGALCVPQGPDPTG-FRCYCVPGFQGP- 103

  Fly   164 FHCE-DIDECQDPAIAAR-CVENAECCNLPAHFLCKCKDGYEGDGEVLC-TDVDECRNPENCGPN 225
             .|| |||||     |:| |...|.|.||...:.|.|..||.|   |.| .:||||.:.. |...
Human   104 -RCELDIDEC-----ASRPCHHGATCRNLADRYECHCPLGYAG---VTCEMEVDECASAP-CLHG 158

  Fly   226 ALCTNTPGNYTCSCPDGYVGNNPYREGCQ-DVDEC-SYPNVCGPGAICTNLEGSYRCDCP-PGYD 287
            ..|.:..|::.|.|..||.|..     || |:||| |.|  |..|..|.:|...:||||. .||:
Human   159 GSCLDGVGSFRCVCAPGYGGTR-----CQLDLDECQSQP--CAHGGTCHDLVNGFRCDCAGTGYE 216

  Fly   288 GDGRSESGCVDQD-ECARTPCGRNADCLNTDGSFRCLCPDGYSGDPMNGCE-DVDECATNNPCGL 350
            |     :.|..:. |||..||..||.||...|||||||..||||:.   || |.|||| ::||..
Human   217 G-----THCEREVLECASAPCEHNASCLEGLGSFRCLCWPGYSGEL---CEVDEDECA-SSPCQH 272

  Fly   351 GAECVN-----LGGSFQCRCPSGFVLEHDPHADQLPQPLNTQQLGYGPGATDIAPYQRTSGAGLA 410
            |..|:.     |.|..|...|..|...|                                .||  
Human   273 GGRCLQRSDPALYGGVQAAFPGAFSFRH--------------------------------AAG-- 303

  Fly   411 CLDIDECNQPDGVAKCGTNAKCINFPGSYRCLCPSGFQGQGYLHC-ENINECQDNPCGENAICTD 474
                                        :.|.||.||:|   ..| ..::||...||.....|.|
Human   304 ----------------------------FLCHCPPGFEG---ADCGVEVDECASRPCLNGGHCQD 337

  Fly   475 TVGSFVCTCKPDYTGDPFRGC-VDIDECTALDKPCGQHAVCENTVPGYNCKCPQGYDGKPDPKVA 538
            ....|.|.|...|.|..   | .|:|||  |..||.....|.:||.||.|:||:.:.|:      
Human   338 LPNGFQCHCPDGYAGPT---CEEDVDEC--LSDPCLHGGTCSDTVAGYICRCPETWGGR------ 391

  Fly   539 CEQVDVNILCSSNFDCT-NNAECIENQCFCLDGFEPIGSSCVDIDECRTHAEVCGPHAQCLNTPG 602
                          ||: ....|..:.|       |:.::|:.|.|...|               
Human   392 --------------DCSVQLTGCQGHTC-------PLAATCIPIFESGVH--------------- 420

  Fly   603 SYGCECEAGYVGSPPRMACKQPCEDVRCGAHAYCKPDQNEAYCVCEDGWTYNPSDVAAGCVDIDE 667
            ||.|.|..|                                                        
Human   421 SYVCHCPPG-------------------------------------------------------- 429

  Fly   668 CDVMHGPFGSCGQNATCTNSAGGFTCACPPGFSGDPHSKCVDVDECRTGASKCGAGAECVNVPGG 732
               .||||  ||||.|.:..||....|                                 :||.|
Human   430 ---THGPF--CGQNTTFSVMAGSPIQA---------------------------------SVPAG 456

  Fly   733 G-------YTCRCPGNTIADPDPSVRCVPIVSCSANEDCPGNSICDATKRCLCPEPNIGNDCRHP 790
            |       :....|..|:|..:.:...:.:...:|....   ::...:...|.        .|.|
Human   457 GPLGLALRFRTTLPAGTLATRNDTKESLELALVAATLQA---TLWSYSTTVLV--------LRLP 510

  Fly   791 CEALNCGAHAQCMLANGQAQCLCAPGYTGNSALAGGCNDIDECRANPCAEK---AICSNTAGGYL 852
            ..|||.|...|..:....|.......:.|             |.|..|...   |:.|..:...|
Human   511 DLALNDGHWHQVEVVLHLATLELRLWHEG-------------CPARLCVASGPVALASTASATPL 562

  Fly   853 CQCPGGSS----GDPYREGCITSKTVGCSDANPCATGETCVQDSYTGNSVCICRQGYERNSENGQ 913
               |.|.|    ||....||:....|         .|...:.:. .|.:|.:   |.||..   |
Human   563 ---PAGISSAQLGDATFAGCLQDVRV---------DGHLLLPED-LGENVLL---GCERRE---Q 608

  Fly   914 CQDVDECSVQRGKPACGLNALCKNLPGSYECRCPQGHNGNPFIMCEICNTPECQCQSPYKLVGNS 978
            |:.:          .|.....|.:|...:.|.|.:.|.|           |.|..:.|....|  
Human   609 CRPL----------PCVHGGSCVDLWTHFRCDCARPHRG-----------PTCADEIPAATFG-- 650

  Fly   979 CVLSGCSSGQACPSGAECI--SIAG---GVSYCACPKGYQTQPDGSCVDVDECEERGAQLCAF-- 1036
              |.|      .||.|..:  .:.|   .||:.     .:|:.....: :....:..|.|..|  
Human   651 --LGG------APSSASFLLQELPGPNLTVSFL-----LRTRESAGLL-LQFANDSAAGLTVFLS 701

  Fly  1037 -GAQCVNKPGSYSCHCPEGYQGDAYNGLCALA----------QRKCAADRECAANEK-------- 1082
             |......|||.:...| |...|....|..|:          |......|..||:.:        
Human   702 EGRIRAEVPGSPAVVLP-GRWDDGLRHLVMLSFGPDQLQDLGQHVHVGGRLLAADSQPWGGPFRG 765

  Fly  1083 CIQ----PGECVCPPPYFLDPQDNNKCKSPCE---RFPCGINAKCTPSDPPQCMCEAGFKGDPLL 1140
            |:|    .|   |..|:|..|.||:  ..|.|   |....:.|                      
Human   766 CLQDLRLDG---CHLPFFPLPLDNS--SQPSELGGRQSWNLTA---------------------- 803

  Fly  1141 GCTDEDECSHLPCAYGAYCVNKKGGYQCVCPKDYTGDPYKSGCIFESGTPKSKCLSNDDC---AS 1202
            ||..||.||..||..|..|:.....:.|.||.::||..    |..:...|...||....|   ..
Human   804 GCVSEDMCSPDPCFNGGTCLVTWNDFHCTCPANFTGPT----CAQQLWCPGQPCLPPATCEEVPD 864

  Fly  1203 NLACL------EG-----SCVSPCSSLLCG--SNAYCETEQHAGWCRCRVG-------YVKNGDG 1247
            ...|:      ||     |..:..|..|.|  |.|:...:..|...|...|       .|:||  
Human   865 GFVCVAEATFREGPPAAFSGHNASSGRLLGGLSLAFRTRDSEAWLLRAAAGALEGVWLAVRNG-- 927

  Fly  1248 DCVSQCQDVICGDGALCIPTSEGPTCKCPQGQLGNPFPG-----GSCSTDQCSAARPCGERQ--- 1304
               |....|..|.|             .|...|  |.||     |:....:.:..||.....   
Human   928 ---SLAGGVRGGHG-------------LPGAVL--PIPGPRVADGAWHRVRLAMERPAATTSRWL 974

  Fly  1305 ---------ICINGRCKERCEGVVCGIGATCDRNNGKCICEPNFVGNPDLICMP-------PIEQ 1353
                     :.:.|...:.  |.:.|.||.      :.:...||.|     |:.       |:..
Human   975 LWLDGAATPVALRGLASDL--GFLQGPGAV------RILLAENFTG-----CLGRVALGGLPLPL 1026

  Fly  1354 AKCSPGCGENAHCEYGLGQSRCACNPGTFGNPYEGCGAQSKNVCQPNSCGPNAECRAVGNHISCL 1418
            |:..||....|       :...|..|||   |....|.:...||.|:.|..:..||.:.:..:|.
Human  1027 ARPRPGAAPGA-------REHFASWPGT---PAPILGCRGAPVCAPSPCLHDGACRDLFDAFACA 1081

  Fly  1419 CPQGFSGNPYIGCQ-DVDECANKPCGLNAACLNRAGGFECLCLSGHAGNPYSSCQ-PIESKFCQD 1481
            |..|:.|.   .|: .||.|.:.||.......:..|.|||.|..|..|   ..|: |:.||    
Human  1082 CGPGWEGP---RCEAHVDPCHSAPCARGRCHTHPDGRFECRCPPGFGG---PRCRLPVPSK---- 1136

  Fly  1482 ANKCQCNERVECPEGYSCQKGQCKNLCSQASCGPRAICDAGNCICPMGYIGDPHD------QVHG 1540
                :|:..|.|.:|..|:.|.                .|.||.|..|..|....      :.:.
Human  1137 ----ECSLNVTCLDGSPCEGGS----------------PAANCSCLEGLAGQRCQVPTLPCEANP 1181

  Fly  1541 CSIRGQC---GNDADCL-----HSEICFQLGKGL 1566
            |...|.|   |..::|:     ..:.| ::.|||
Human  1182 CLNGGTCRAAGGVSECICNARFSGQFC-EVAKGL 1214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 11/32 (34%)
EGF_CA 212..247 CDD:238011 12/34 (35%)
EGF_CA 255..>286 CDD:214542 14/32 (44%)
EGF_CA 298..331 CDD:238011 19/33 (58%)
EGF_CA 338..373 CDD:238011 14/39 (36%)
EGF_CA 413..456 CDD:238011 7/43 (16%)
EGF_CA 457..490 CDD:238011 10/32 (31%)
EGF_CA 497..>529 CDD:214542 15/31 (48%)
EGF_CA 580..>612 CDD:214542 7/31 (23%)
EGF_3 676..702 CDD:289699 8/25 (32%)
EGF_CA 1022..1056 CDD:214542 9/36 (25%)
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
CRB2NP_775960.4 Required for maximum inhibition of APP amyloid-beta peptide secretion. /evidence=ECO:0000269|PubMed:20299451 1..350 127/401 (32%)
EGF_CA 108..144 CDD:238011 18/43 (42%)
EGF_CA 147..182 CDD:238011 12/40 (30%)
EGF_CA 184..221 CDD:238011 17/43 (40%)
EGF_CA 226..259 CDD:238011 20/35 (57%)
EGF_CA 321..356 CDD:238011 11/37 (30%)
EGF_CA 358..393 CDD:238011 16/56 (29%)
Laminin_G_2 465..588 CDD:280389 28/158 (18%)
LamG 653..773 CDD:238058 26/132 (20%)
EGF_CA 812..842 CDD:238011 10/33 (30%)
LamG 900..1024 CDD:304605 27/156 (17%)
EGF 1060..1090 CDD:278437 9/32 (28%)
Interaction with EPB41L5. /evidence=ECO:0000269|PubMed:17920587 1249..1285
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.