DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and Sned1

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_766051.4 Gene:Sned1 / 208777 MGIID:3045960 Length:1403 Species:Mus musculus


Alignment Length:805 Identity:201/805 - (24%)
Similarity:285/805 - (35%) Gaps:230/805 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 SKLCDGTQDCFLGADELSKELKCTNDCDKDGTKCTHGACLNGVCHCNDGYGGCNCVDKDENECKQ 135
            :.:|...:.|..|.       ||.:||.......|        |.|..|:.|..| ..|.|||..
Mouse   269 TSVCLVLRPCLNGG-------KCIDDCVTGNPSYT--------CSCLAGFTGRRC-HLDVNECAS 317

  Fly   136 RPCDVFAHCTNTLGSFTCTCFPGYRGNGFHCEDIDECQDPAIAARCVENAECCNLPAHFLCKCKD 200
            .||.....||:.:.||:|.|..|::|.  .||   ..|.|.....|....:|....:..:|.|:.
Mouse   318 HPCQNGGTCTHGVNSFSCQCPAGFKGP--TCE---SAQSPCDNKVCQNGGQCQAESSSAVCVCQA 377

  Fly   201 GYEGDGEVLC-TDVDECRNPENCGPNALCTNTPGNYTCSCPDGYVGNNPYRE-GCQDVDECSYPN 263
            ||.|   ..| |||||| :.:.|.....|.:..|||:|.|.:.:.|  |..| |...|......|
Mouse   378 GYTG---ATCETDVDEC-SSDPCQNGGSCVDLVGNYSCICVEPFEG--PQCETGSYLVPSPCLSN 436

  Fly   264 VCGPGAICTNLEGSYRCDCPPGYDGDGRSESGCVDQ--DECARTPCGRNADCLNTDGSFRCLCPD 326
            .|..|..|.:.:..|.|:||.|:.|     ..|.::  ::|   .|.....||..:.:. |.||.
Mouse   437 PCQNGGTCVDADEGYVCECPEGFMG-----LDCRERILNDC---DCRNGGRCLGANTTL-CQCPP 492

  Fly   327 GYSGDPMNGCE---DVDECATNNPCGLGAECVNLGGSFQCRCPSGFVLEHDPHADQLPQPLNTQQ 388
            |:.|   ..||   ....|..|..|..|..|:..|||:.|.|.:...:.|     .||.|.::. 
Mouse   493 GFFG---LLCEFEVTATPCNMNTQCPDGGYCMEYGGSYLCVCHTDHNISH-----SLPSPCDSD- 548

  Fly   389 LGYGPGATDIAPYQRTSGAGLACLDIDECNQPDGVAKCGTNAKCINFPGSYRCLCPSGFQGQGYL 453
                                                .|.....|.....||.|.||.||.|:   
Mouse   549 ------------------------------------PCFNGGSCDAHEDSYTCECPRGFHGR--- 574

  Fly   454 HCENINE--CQDNPCGENAICTDTVGSFVCTCKPDYTGDPFRGCVDI---DECTALDKPCGQHAV 513
            |||....  |...||.....|.:....:.|||...:||   |.| :|   |.|.:  .||.....
Mouse   575 HCEKARPHLCSSGPCRNGGTCKEMGDEYRCTCPYRFTG---RHC-EIGKPDSCAS--GPCHNGGT 633

  Fly   514 CENTVPGYNCKCPQGYDGKPDPKVACEQVDVNILCSSNFDCTNNAECIENQCF---CLDGFEPIG 575
            |.:.:..|.|.||.|:.|:                        :.|...:.||   |::     |
Mouse   634 CFHYIGKYKCDCPPGFSGR------------------------HCEIAPSPCFRSPCMN-----G 669

  Fly   576 SSCVDIDECRTHAEVCGPHAQCLNTPGSYGCECEAGYVGSPPRMACKQPCEDVRCGAHAYC-KPD 639
            .:|.|:..                   .:.|.|:.||.|.             ||.|...| .|:
Mouse   670 GTCEDLGT-------------------DFSCYCQPGYTGH-------------RCQAEVDCGHPE 702

  Fly   640 QNE--------------AYCVCEDG-----------------WTYNPSDVAAGCVDIDEC---DV 670
            :.|              |...||.|                 |:..|.     |:::|||   ..
Mouse   703 EVEHATMRFNGTHVGSVALYTCEPGFSLSALSHIRVCQPQGVWSQPPQ-----CIEVDECRSQPC 762

  Fly   671 MHGPFGSCGQNATCTNSAGGFTCACPPGFSGDPHSKCVDVDECRTGASKCGAGAECVNVPGGGYT 735
            :||        .:|.:....:.|.|.||:.| .|.: ::.|||:  |..|..|..|.::| ..:.
Mouse   763 LHG--------GSCQDLIADYQCLCSPGYEG-VHCE-LETDECQ--AQPCRNGGSCRDLP-RAFI 814

  Fly   736 CRCPGNTIADPDPSVRCVPIVSCSANEDCPGNSICD---ATKRCLCPEPNIGNDCR---HPCEAL 794
            |:||...:     .:.|...|...|:..|.....|:   ....|:|||...|.:|.   .||.:.
Mouse   815 CQCPEGFV-----GIHCETEVDACASSPCQHGGRCEDGGGAYLCVCPEGFFGYNCETVSDPCFSS 874

  Fly   795 NCGAHAQCMLANGQAQCLCAPGYTG 819
            .||:...|:.:||...|.|..||||
Mouse   875 PCGSRGYCLASNGSHSCTCKVGYTG 899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 10/28 (36%)
EGF_CA 212..247 CDD:238011 13/34 (38%)
EGF_CA 255..>286 CDD:214542 9/30 (30%)
EGF_CA 298..331 CDD:238011 8/34 (24%)
EGF_CA 338..373 CDD:238011 10/34 (29%)
EGF_CA 413..456 CDD:238011 11/42 (26%)
EGF_CA 457..490 CDD:238011 8/34 (24%)
EGF_CA 497..>529 CDD:214542 10/34 (29%)
EGF_CA 580..>612 CDD:214542 3/31 (10%)
EGF_3 676..702 CDD:289699 5/25 (20%)
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
Sned1NP_766051.4 NIDO 104..260 CDD:214712
EGF_CA 272..308 CDD:238011 12/50 (24%)
EGF_CA 311..347 CDD:238011 14/37 (38%)
EGF_CA 387..423 CDD:238011 14/38 (37%)
EGF_CA 433..464 CDD:238011 10/35 (29%)
EGF_CA 545..577 CDD:238011 11/71 (15%)
EGF_CA 585..616 CDD:238011 10/34 (29%)
EGF_CA 621..655 CDD:238011 11/59 (19%)
EGF_CA <664..693 CDD:238011 10/65 (15%)
CCP 698..752 CDD:153056 9/58 (16%)
EGF_CA 754..789 CDD:238011 12/43 (28%)
EGF_CA 793..827 CDD:238011 11/41 (27%)
EGF_CA 830..865 CDD:238011 9/34 (26%)
fn3 908..988 CDD:278470
FN3 1005..1084 CDD:214495
fn3 1106..1184 CDD:278470
EGF_CA 1311..1342 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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