DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and Nid2

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_032721.2 Gene:Nid2 / 18074 MGIID:1298229 Length:1403 Species:Mus musculus


Alignment Length:1403 Identity:271/1403 - (19%)
Similarity:396/1403 - (28%) Gaps:611/1403 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 YREGCQDVDECSYPNVCGPGAI---CTNLEGSYRCDCPPGYDGDGRSESGCVDQDECA------- 303
            |.|..:||:   ||.| .||..   .:.::.|:.....||....|.|..|   .|..:       
Mouse   318 YDENEEDVE---YPPV-EPGEAPEGHSRIDVSFNSKADPGLVDVGTSSPG---SDRASPWPYPAP 375

  Fly   304 -RTPCGRNADCLNTDGSFRCLCPDGYSGDPM---------NGCEDVDECATNNPCGLGAECV--- 355
             ..|..|..:..:.|       |....|.|:         :..|.:|:..|..|....|:..   
Mouse   376 GNWPSYRETESASLD-------PQTKQGRPVGEGEVLDFRDPAELLDQMGTRAPAPPEADAALLT 433

  Fly   356 ----NLGGSFQCRCPSGFVLEHDPHADQLPQPLNTQQLGYGPGATDIAPYQRTSGAGLACLDIDE 416
                :|||......|....:..:|  |....||..:.|.:.|.:..:.|.:    .|...:.:::
Mouse   434 PVNEDLGGRNTQSYPEAGPVPSEP--DVPVPPLEGEVLPHYPESGHVPPLR----GGKYVIGLED 492

  Fly   417 CNQPDGVAKCGTNAKCINFPGSYRCLCPSGFQGQGYLHCENINECQDN--PCGENAICTDTVGSF 479
                    ..|:|.:...:.|:                  |:..|:.:  .|.::|.|||....|
Mouse   493 --------HVGSNDQVFTYNGA------------------NLETCEHSHGRCSQHAFCTDYTTGF 531

  Fly   480 VCTCKPDYTGDPFRGCVDIDECTALDKPCGQHAVCENTVPGYNCKCPQGYDGKPDPKVACEQVDV 544
            .|.|:..:.|:                  |:|.:.|.        .|...:||...::....:.|
Mouse   532 CCHCQSRFYGN------------------GKHCLPEG--------APHRVNGKVSGRLRVGHIPV 570

  Fly   545 NILCSSNFDCTNNAECIENQCFCLDGFEPIGSSCVDIDECRTHAEVCG--------------PHA 595
            :.                                .|:|   .||.:.|              |.|
Mouse   571 HF--------------------------------TDVD---LHAYIVGNDGRAYTAISHVPQPAA 600

  Fly   596 Q----------------CLNTPGS----------YGCECEAGYVGSPPRMACKQPCED------- 627
            |                .|..|||          :..:.|..:.....|:...|..|.       
Mouse   601 QALLPVLPIGGLFGWLFALEKPGSENGFSLTGATFVHDVEVTFHPGEERVRITQTAEGLDPENYL 665

  Fly   628 ------------VRCGAHAYCKP-----------------------------------DQNEAYC 645
                        :.....|:..|                                   |||..|.
Mouse   666 SIKTNIEGQVPFIPANFTAHITPYKEFYHYRDSVVTSSSSRSFSLTSGSINQTWSYHIDQNITYQ 730

  Fly   646 VC-------------------------EDGWT--------YNPSDVAAGCVDIDEC-DVMHGPFG 676
            .|                         ||...        ..|.:|.:..|.::.| |..|    
Mouse   731 ACRHAPRHLAIPATQQLTVDRAFALYSEDEGVLRFAVTNQIGPVEVDSAPVGVNPCYDGSH---- 791

  Fly   677 SCGQNATCTNSAG-GFTCACPPGFSGDPHSKCVDVDECRTGASKCGAGAECVNVPGGGYTCRC-P 739
            :|...|.|....| .:||.|.|||.||..| ||||:||.||..:||..:.|||:. |.|.|.| .
Mouse   792 TCDTTARCHPGTGVDYTCECTPGFQGDGRS-CVDVNECATGFHRCGPNSVCVNLV-GSYRCECRS 854

  Fly   740 GNTIADPDPSVRCVPIVSCSANEDCPGNSICDATKRCLCPEPNIGNDCRHPCEALNCGAHAQCML 804
            |...||...:  |:                      .:.|.||...|..|.|..   ...|:|:.
Mouse   855 GYEFADDQHT--CI----------------------LIAPPPNPCLDGSHTCAP---EGQARCIH 892

  Fly   805 ANGQA-QCLCAPGYTGNSALAGGCNDIDECRANPCAEKAICSNTAGGYLCQCPGGSSGDPYREGC 868
            ..|.: .|.|.||:.|.   ...|:|:|||..|.|.|.|||.||.|.:.|:|..|..||.:.   
Mouse   893 HGGSSFSCACLPGFIGT---GHQCSDVDECAENRCHEAAICYNTPGSFSCRCQPGYRGDGFH--- 951

  Fly   869 ITSKTVGCSDANPCATGETCVQDSYTGNSVCICRQGYERNSENGQCQDVDECSVQRGKPACGLNA 933
                          .|.:|..:||.:|...|..:|.|      .|.|..                
Mouse   952 --------------CTSDTVPEDSISGLKPCEYQQRY------AQTQHA---------------- 980

  Fly   934 LCKNLPGSYECRCPQGHNGNPFIMCEICNTPECQCQSPYKLVGNSCVLSGCSSGQACPSGAECIS 998
                .|||.                  .:.|:|..|      ||...|             :|  
Mouse   981 ----YPGSR------------------IHIPQCDDQ------GNFVPL-------------QC-- 1002

  Fly   999 IAGGVSYCACPKGYQTQPDGSCVDVDECEERGAQLCAFGAQCVNKPGSYSCHCPEGYQGDAYNGL 1063
             .|...:|            .|||.:..|..|.|         ..|||...|             
Mouse  1003 -HGSTGFC------------WCVDRNGHEVPGTQ---------TPPGSTPPH------------- 1032

  Fly  1064 CALAQRKCAADRECAANEKCIQPGECVCPPPYFLDPQDNNKCKSPCERFPCGI--NAKCTPSDP- 1125
                                       |.||    |:...:.::.|||:...:  :...||.|. 
Mouse  1033 ---------------------------CGPP----PEPTQRPRTVCERWRESLLEHYGGTPRDDQ 1066

  Fly  1126 --PQCMCEAGFKGDPLLGCTDEDECSH---LPCAYG----AYCVNKKG----------GYQCVC- 1170
              |||                 |:..|   |.| :|    .:||:|.|          |.:..| 
Mouse  1067 YVPQC-----------------DDLGHFIPLQC-HGKSDFCWCVDKDGRELQGTRSQPGTRPACI 1113

  Fly  1171 -----------PK-DYTGDPYKSGCIFESG-----TPKSKCLSNDDCASNLACLEGSCVSPCSSL 1218
                       |: |.|.....:..::..|     .|.:......|.|..|..|.||.|      
Mouse  1114 PTVAPPVVRPTPRPDVTPPSVGTFLLYAQGQQIGHLPLNGSRLQKDAARTLLSLHGSIV------ 1172

  Fly  1219 LCGSNAYCETEQHAGW---CRCRVGYVKNGDGDCVSQCQ-------DVICGDGALCIPTSEGPTC 1273
                         .|.   ||.|:.|..:..|..:|:..       :.|...|.:          
Mouse  1173 -------------VGIDYDCRERMVYWTDVAGRTISRASLEAGAEPETIITSGLI---------- 1214

  Fly  1274 KCPQGQLGNPFPGGSCSTDQCSAARPCGERQICINGRCKERCEGVVCGIGATCDRNNGKCICEPN 1338
             .|:|...:.|......||.       |..:|       ||.|         .|.:..|.:...:
Mouse  1215 -SPEGLAIDHFRRTMYWTDS-------GLDKI-------ERAE---------LDGSERKVLFHTD 1255

  Fly  1339 FVGNPDLICMPPIE-------------QAKCSPGCGENAHC----EYGLGQSRCACNPGTFGNPY 1386
            .| ||..|.:.||.             :.:.|...|||...    :.||.      |..|| :|:
Mouse  1256 LV-NPRAITVDPIRGNLYWTDWNREAPKIETSSLDGENRRILINKDIGLP------NGLTF-DPF 1312

  Fly  1387 EGCGAQSKNVCQPNSCGPNAEC--------RAVGNHIS 1416
                  ||.:|..::.....||        |.:.||::
Mouse  1313 ------SKLLCWADAGTKKLECTLPDGTGRRVIQNHLN 1344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542 9/33 (27%)
EGF_CA 298..331 CDD:238011 5/40 (13%)
EGF_CA 338..373 CDD:238011 8/41 (20%)
EGF_CA 413..456 CDD:238011 3/42 (7%)
EGF_CA 457..490 CDD:238011 10/34 (29%)
EGF_CA 497..>529 CDD:214542 4/31 (13%)
EGF_CA 580..>612 CDD:214542 13/71 (18%)
EGF_3 676..702 CDD:289699 10/26 (38%)
EGF_CA 1022..1056 CDD:214542 8/33 (24%)
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
Nid2NP_032721.2 NIDO 108..275 CDD:214712
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 323..403 20/93 (22%)
EGF_3 511..546 CDD:289699 11/52 (21%)
nidG2 548..780 CDD:294123 32/274 (12%)
EGF_3 786..822 CDD:289699 16/40 (40%)
EGF_CA 824..865 CDD:284955 18/43 (42%)
EGF_3 875..913 CDD:289699 11/43 (26%)
EGF_3 919..952 CDD:289699 15/49 (31%)
Cell attachment site 946..948 0/1 (0%)
TY 967..1028 CDD:238114 24/147 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1021..1043 10/74 (14%)
TY 1047..1112 CDD:238114 19/82 (23%)
LY 1162..1200 CDD:214531 12/56 (21%)
LDL-receptor class B 1 1182..1225 8/53 (15%)
LY 1206..1248 CDD:214531 13/75 (17%)
LDL-receptor class B 2 1226..1268 14/65 (22%)
LY 1249..1293 CDD:214531 10/44 (23%)
LDL-receptor class B 3 1269..1313 10/56 (18%)
LY 1294..1336 CDD:214531 11/54 (20%)
LDL-receptor class B 4 1314..1355 7/31 (23%)
LDL-receptor class B 5 1357..1401
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 55 1.000 Domainoid score I11067
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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