DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and C29A12.6

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_001256272.1 Gene:C29A12.6 / 179504 WormBaseID:WBGene00007800 Length:980 Species:Caenorhabditis elegans


Alignment Length:1262 Identity:280/1262 - (22%)
Similarity:420/1262 - (33%) Gaps:378/1262 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  6904 VPIGSTGGQVTEQTTSSPSEVRTTIGLEESTLPSRSTDRTSPSESPETPTTLPSDFITRPHSDQT 6968
            :|......:|..:|.|.....|.||..:.:...:.............:|..| ..||:|......
 Worm     6 IPFCPLNWKVKRRTFSKAMNRRLTISHKNNNNMNNKQKMVQLDIREPSPLFL-IHFISRIFLCSA 69

  Fly  6969 TESTRDVPTTRPFEASTPSS--------ASLETTVPSV---------TLETTTNVPIGSTGGQVT 7016
            .:..|.:.:::......|||        .|::.|:..|         |||.:.:..|     ||.
 Worm    70 EKRIRKLFSSKKMSRFWPSSIALFSILLISIQQTLACVDILFVIDNKTLEVSRSRAI-----QVA 129

  Fly  7017 EQTTSSPSEVRTTIRVEESTLPSRSTDRTTP---SESPETPTTLPSDFTTRPHSD-------QTT 7071
            :       |:....::.:..:.||: ||..|   ..:.|..|.|     ...|.|       .|.
 Worm   130 K-------ELPEDQKIRKWVVLSRN-DRYVPRVLRNNAELQTVL-----NTIHGDYDRFLEIATG 181

  Fly  7072 ESSRDVPTTQPFEASTPRPVTLQTAVLPVTSETTTNVPIGSTGGQVTEQTTSSPSEVRTTIRVEE 7136
            |.:|...|.|||             |:.:.|||    |:..|...:....:.:|:     :.:..
 Worm   182 EIARRTATFQPF-------------VILLFSET----PVNQTMTNMWRNISLAPA-----LHIYR 224

  Fly  7137 STLPSRSTDRTTPSESPETPTTLPSDFTTRPHSDQTTESSRDVPTTQPFESSTPRPVTLETAVPP 7201
            .....|||...  ||..|      .||      ::..|..|:..:...|:||     ........
 Worm   225 IGSLQRSTKML--SEDQE------MDF------EKLIECGRNQSSLFGFDSS-----KFHGGNEI 270

  Fly  7202 VTSETTTNVPIGSTGGQVTEQTTPSPSEVRTTIRIEESTFPSRSTDRTTPSESPETPTTLPSDFT 7266
            ..|.|:|:.|..||.|..                :...||...|.......:..|. :.:.:.||
 Worm   271 RRSPTSTHRPWTSTRGPF----------------VRRLTFYDASQALINQKKKEEL-SKVDTKFT 318

  Fly  7267 -TRPHSDQTTESTRDVP--TTRPFESSTPRPVTLEIAVPPVTSETTTNVAIGSTGGQVTEQTTSS 7328
             ||.....||     :|  |||...::|.||.|.:                     :...::||.
 Worm   319 ITRTFKKMTT-----IPMSTTRRMTTTTIRPKTTK---------------------KYLSRSTSK 357

  Fly  7329 PSEVRTTIRVEESTLPSRSTDRTTPSESPETPTTLPSD--FTTR-PHSDQTT---ESTRDVPTTR 7387
            ....:||          ||...||.|..|...||.|..  .|:| |||.|.:   .|.|.  ||.
 Worm   358 YDAKKTT----------RSYQTTTRSVQPRKATTKPRSLALTSRNPHSQQKSVQVSSKRS--TTS 410

  Fly  7388 PFEASTPSPASLETTVPSVTLETTTSVPMGSTGGQVTGQTTAPPSEVRTTIRVEESTLPSRSTDR 7452
            ..:.:|.:|....||..|.:..|||..|| :|....|.|||..|..|  |.|.|...|       
 Worm   411 RMKTTTKTPRWATTTRASQSRGTTTKTPM-TTRFTRTMQTTRTPWWV--TTRWEAKIL------- 465

  Fly  7453 TPPSESPETPTTLPSDFTTRPHSDQTTESSRDVPTTQPFESSTPRPVTLEIAVP--PVTS----E 7511
                      ..|...|:...|...|..:|:.:.||:     |||.......||  ..||    .
 Worm   466 ----------VKLIKKFSRSVHLSATNTTSKQITTTR-----TPRRAVATSKVPWWSTTSRAAKH 515

  Fly  7512 TTTNVPIGSTGGQVTGQTTATPSEVRTTIGVEESTLPSRSTDRT-TPSESPET-PTTLPSDFTTR 7574
            ||||||..:||       |..|..:...:    ...|.|...|| .||.|..| .:|:..|:   
 Worm   516 TTTNVPWWATG-------TRRPKVIDRNL----LNSPLREQFRTRQPSLSGITRGSTISKDY--- 566

  Fly  7575 PHSDQTTESTRDVPTTRP---------FEASTPSPASLETTV-----PSVTLETTTNVPIGSTGG 7625
             |.:........|||:.|         |....|.| .:.:.:     |...|.:..||...:..|
 Worm   567 -HKNFMMGYNYKVPTSEPRNSGKLLQLFHGGLPQP-DVHSILQLLHDPVCGLPSDVNVFDRAPQG 629

  Fly  7626 QVTGQTTATPSEVRTTIGVEESTLPSRSTDRTTPSESPETPTTLPSDFTTR-PHSDQTTESTRDV 7689
            |||  ||..|....|:...:.|||.:|                :|...||| |.|.::  ||| :
 Worm   630 QVT--TTRVPWWKTTSRPAQTSTLTTR----------------VPWWATTRAPESGKS--STR-I 673

  Fly  7690 P----TTR-PFEASTPRPVTLETAVPSVTSETTTNVPIGSTVTSETTTNVPIGSTGGQVAGQTTA 7749
            |    ||| |:..:|.|..|  |..|..:|:.|.: |:.:|...:.|...|..|.|      ||.
 Worm   674 PWWATTTRAPYPTTTTRKTT--TRTPWWSSQITRS-PLRTTSKPDNTFWHPTESFG------TTR 729

  Fly  7750 PPSEVRTTIRVEESTLPSRSADRTTPSESPETPTTLPSDFTTRPHSEQTTESTRDVPTT----RP 7810
            .|:.|.|.    :|.|            .||.|...|.||..|..|.|...:.:...||    ..
 Worm   730 SPAPVSTI----DSPL------------KPEVPVIKPMDFMVRSRSVQFAMTEKPPFTTVMNPMK 778

  Fly  7811 FEASTPSPASL-ETTVP-SVTSETTTNVPIGSTGGQLTEQSTSSPSEVRTTIRVEESTL------ 7867
            |..:|.:|.:. :..:| |.|::....|.:....|..::|.....:...:::.:.:.|:      
 Worm   779 FFTTTRTPITKPKPLIPYSCTADVFFLVDVSQGTGDKSQQYLDIAASAISSLPISQDTVRVGLIS 843

  Fly  7868 ---PSRSTDRTFPSESPEKPTTLPSDFTTRPHLEQTTESTRDVLTTRPFETSTPSPVSLETTVPS 7929
               |.|:..|.|..:..||...:...|....|                                 
 Worm   844 YSGPGRTHVRVFLDKHNEKEKLIEEMFLMERH--------------------------------- 875

  Fly  7930 VTSETSTNVPIGSTGGQVTEQTTAPPSVRTTETIVKST-------HPAVSPDTTIPSEIPATRVP 7987
                          ||          :.||.:.|..:|       |||              |..
 Worm   876 --------------GG----------TTRTADAIRYATKIFEGKAHPA--------------RKN 902

  Fly  7988 LESTTRLYTDQTIPPGSTDRTTSSERPDESTRLTSEESTETTRPVPTVSPRDALETTVTSLITET 8052
            ::....::||          ..|.:.|.|::|:...:..:    :..|:.:|.|....|..:||.
 Worm   903 VKKVLVVFTD----------GYSQDNPKEASRMARAKGIQ----LIAVAVKDRLAPPDTEQLTEI 953

  Fly  8053 TKTTSGGTPRGQVTERTTKSVSELTTG 8079
                 ||..|......:.:.:.|...|
 Worm   954 -----GGNGRSIFISPSGRDLREKIIG 975

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395 19/111 (17%)
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572 7/36 (19%)
DUF4758 6866..7045 CDD:292572 29/157 (18%)
DUF4758 6968..7179 CDD:292572 48/237 (20%)
DUF4696 7024..7569 CDD:292395 140/571 (25%)
DUF4758 7172..7383 CDD:292572 51/219 (23%)
DUF4696 7330..7964 CDD:292395 167/682 (24%)
DUF4758 7400..7587 CDD:292572 54/194 (28%)
DUF4758 7538..7707 CDD:292572 51/190 (27%)
DUF4758 7798..7979 CDD:292572 29/202 (14%)
DUF4758 7946..8126 CDD:292572 25/141 (18%)
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
C29A12.6NP_001256272.1 PHA03255 370..>521 CDD:165513 56/177 (32%)
ActA <682..762 CDD:282861 29/104 (28%)
VWA_integrin_invertebrates 800..963 CDD:238753 37/252 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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