DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and noah-2

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_502699.1 Gene:noah-2 / 178365 WormBaseID:WBGene00009926 Length:741 Species:Caenorhabditis elegans


Alignment Length:792 Identity:162/792 - (20%)
Similarity:278/792 - (35%) Gaps:193/792 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly 22219 FECSKIECSINSDCP-----GTHV--------------CRNQLCIPACQGEQ--CGSNAQCLAIE 22262
            ||||..|.:.....|     ||.|              |||.  |....|.|  |.|    ...:
 Worm    19 FECSSHETTAFVRIPRARLDGTPVVISTAGHDLTCAQYCRNN--IEPTTGAQRVCAS----FNFD 77

  Fly 22263 HRAVCECIPGHGGNARIACTPLGCRSDDECPT------DKACV-NGKCNDPCTTTALCAQDELCK 22320
            .|..|.....       |.||.|.......|:      :|.|: |...::.||..:...:     
 Worm    78 GRETCYFFDD-------AATPAGTSQLTANPSANNFYYEKTCIPNVSAHEACTYRSFSFE----- 130

  Fly 22321 VYHHRPQCACPPGTVPGKNGCESERHIPICISDADCPSQKACLRGE---C--VNPCNATQPCGVN 22380
                |.:.....|.|......|:..|   |:|        |||:.:   |  ||....|..|.: 
 Worm   131 ----RARNTQLEGFVKKSVTVENREH---CLS--------ACLKEKEFVCKSVNFHYDTSLCEL- 179

  Fly 22381 AFCSVRD--TLPVRTMICECLEGYTGNPAVQCDKRSLCVIEKGFVRDVDGQCVCPPGTALDI--Y 22441
               ||.|  :.|....:.|.::.|..|          |:..:.......|..|....|..:|  |
 Worm   180 ---SVEDKRSKPTHVRMSEKIDYYDNN----------CLSRQNRCGPSGGNLVFVKTTNFEIRYY 231

  Fly 22442 EYCTPCREEQGFRIDESGHCVCAL------------ERGMVIDERGRCTCPIDLGYRLTPRGE-- 22492
            ::......::.:.:.:   |:.:|            |:..::.:.       |...|...:|:  
 Worm   232 DHTQSVEAQESYCLQK---CLDSLNTFCRSVEFNPKEKNCIVSDE-------DTFSRADQQGQVV 286

  Fly 22493 --------CQPEEPPECTSNDQCADNRFCNLDTK----------TCEDPCLTKVCGVNAFCNAVN 22539
                    |...:....|...|.|..||.....:          |..| |:: :|..|..|.::|
 Worm   287 GKDYYEPICVAADLSSSTCRQQAAFERFIGSSIEGEVVASAQGVTISD-CIS-LCFQNLNCKSIN 349

  Fly 22540 H-RAQCQCITGYTG--------NPDLHCNHTNFRTDFPRPDMVVSCLADGVQVEIHITEPGFNGV 22595
            : |....|.....|        ||.:.....|..:.|   ..:..|..:|::..::..|| :.|.
 Worm   350 YDRTASSCFIYAVGRQDANIKANPSMDYYEFNCESQF---GGMALCTNEGIRFIVNTKEP-YTGA 410

  Fly 22596 LYVKGHSKDEECRRVVNLAGE---TVPRTEIFRVHFGSCGMQAVKDVASFVLVIQKHPKLVTYKA 22657
            :|..  .:...|.:||..|.:   |.|...:    ...|| ..::|.....||:.....::.::.
 Worm   411 IYAA--ERFSTCSQVVENAKQISITFPPPTV----SSDCG-TVIRDGKMEALVVVSLDGVLPHQV 468

  Fly 22658 -----QAYNIKC------VYQTGEKNVTLGFNVSMLTTAGTIANTGPPPICQMRIITNEGEEINS 22711
                 :.|.:.|      :.:.|...||..:..|...|......|.||...:::|:....|.::.
 Worm   469 TTEWDRFYRVSCDVSMDKMVKEGSVVVTTIYEASSQNTTVLDVATPPPVSAELQILNQLEEPLHK 533

  Fly 22712 AEIGDNLKLQVDVEPATIYGGFARSCIAKTMEDNVQNEYLVTDENGCATDTSIFGNWEYNPDTNS 22776
            |.|||.|.|.:..|.|..:......|.|..:............||||....::.|..|.:.|.|.
 Worm   534 ASIGDPLLLVITSEQAGPHNMMVTECTATRVGGFGDTVPFTLIENGCPRYPALVGPVEQDFDKNR 598

  Fly 22777 LLASFNAFKFPSSDNIRFQCNIRVCFG--RCQPVNC--GGYN----AFGRRRRSI---ADNSTDA 22830
            |.:...||:...|.:::..|:|..|.|  .|...||  .|.|    :.||::||.   |..:.:.
 Worm   599 LKSDLRAFRLDGSYDVQIVCSIMFCAGPNGCPVSNCLDSGTNELFMSHGRKKRSADLEAGETEEK 663

  Fly 22831 TAIATNSGVEGQLREEITISSNAILTFEKRSGQGLNDANIKPAAQRVEDICVS---MVGLIIALV 22892
            .:.......:|:..||:.:::|.::|       .::|:        .|.:|::   .|..:::|.
 Worm   664 LSAIIRVFAKGEDEEEMEMANNTMMT-------SMSDS--------TELLCIAEPFFVSSVVSLS 713

  Fly 22893 IT--ALLALVAV 22902
            :.  ||.|::|:
 Worm   714 VLCFALSAIIAI 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579 58/252 (23%)
Zona_pellucida <22714..22810 CDD:278526 26/97 (27%)
noah-2NP_502699.1 PAN_1 28..112 CDD:278453 20/96 (21%)
PAN_AP_HGF 125..203 CDD:238532 21/101 (21%)
PAN_AP_HGF 217..292 CDD:238532 10/84 (12%)
PAN_1 310..382 CDD:278453 15/73 (21%)
ZP 392..634 CDD:214579 56/249 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.