DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and noah-1

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_001250022.1 Gene:noah-1 / 172261 WormBaseID:WBGene00016422 Length:1052 Species:Caenorhabditis elegans


Alignment Length:1211 Identity:248/1211 - (20%)
Similarity:391/1211 - (32%) Gaps:421/1211 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly 21921 CPDQEACIHAQCRNPCNCGTNAVCQVTQHRAVCS--CQDGFEGNPYASCRSIGCRVDGECDSGKA 21983
            ||.:...|.....| ...|.......|.:.|.||  |....:      |:.:..: ||.|...:|
 Worm    25 CPPETQTIFVLQHN-TTVGARIRTIPTSNLAECSDHCSASLD------CQGVEFK-DGSCAVFRA 81

  Fly 21984 CINGDCINPCLINDPCGPNAECYVQSNRAQCRCLSGYRGNPYERCRVIG-------CSSNNDCPT 22041
            ..........|:...|       |:|:|.   |.|.::.:.:|:..::|       .::...|..
 Worm    82 GSEKATAGSQLLTKTC-------VKSDRV---CQSPFQFDLFEQRILVGFAREVVPAANIQICMA 136

  Fly 22042 DKTCQNE------QCVNPCVY--HNPCAPRAECRAQNHLAVCRCPVDFLGNPYVDCRPPPQPICQ 22098
              .|.|.      :|.:...|  ...|....|              |.|..|.:........:..
 Worm   137 --ACLNAFDTFGFECESAMFYPVDQECILNTE--------------DRLDRPSLFVEESDDTVIY 185

  Fly 22099 LDTDCPGRQACINEQCVDPCVV---------------------LEPCQRPAICEVTPTSPV---- 22138
            :|.:|.|      .||..|.:.                     |:.||  |:|  |....:    
 Worm   186 MDNNCAG------SQCYPPYITQYIAVEGKQLKNELDRIINVDLDSCQ--ALC--TQRLSISSND 240

  Fly 22139 ----------RTMLCICPD---------------GYVSRGK------GGCKPTPGIKEVGGCI-- 22170
                      :|..||..|               |:....|      ..|:..|..|.|...|  
 Worm   241 FNCKSFMYNNKTRTCILADERSKPLGRADLIATEGFTYFEKKCFASPNTCRNVPSFKRVPQMILV 305

  Fly 22171 -----SDSDCPTDKSCLNSVCRDPCNCGLNAECRIKDHKPVCTCRQGFEGNPEFECSKIECSINS 22230
                 ...:.|:...||:.....|...|....|:                :..:..::.||.:||
 Worm   306 GFAAFVMENVPSVTMCLDQCTNPPPETGDGFVCK----------------SVMYYYNEQECILNS 354

  Fly 22231 DCPGTHVCRNQLCIPACQGEQCGSNAQCLAIEHRAVCECIPGHGGNARIACTPLGCRSDDECPTD 22295
            :   |...:.:|.||  :||:       ..:::             ..|.|.    ...::|||.
 Worm   355 E---TRESKPELFIP--EGEE-------FLVDY-------------FDITCH----LKQEKCPTG 390

  Fly 22296 KACVNGKCNDPCTTTALCAQDELCKVYHHRP----QCACPPGTVPGKNGCESERHIPICISDADC 22356
            :                          |.:.    ..|.|.|        |||.|:         
 Worm   391 Q--------------------------HLKAIRTINAALPEG--------ESELHV--------- 412

  Fly 22357 PSQKACLRG--ECVNPCNATQPCGVNAFCSVRDTLPVRTMICEC--LEGY-TGNPAVQ--CDKRS 22414
             .:.:..:|  |||..|....|....:|     ....:|..|:.  |:|: |..|.|:  .|...
 Worm   413 -LKASAAKGIKECVAKCFGLAPEKCRSF-----NYDKKTKSCDLLYLDGHNTLQPQVRQGVDLYD 471

  Fly 22415 L-CVIEKGFVRDVDGQCVCPPGTALDIYEYCTPCREEQG-----FRIDESGHC--VCALERGMVI 22471
            | |:.       |:..|......||......|   :::|     :::.....|  |||       
 Worm   472 LHCLA-------VENDCSANKDDALFSRYLHT---KQRGIPAKVYKVVSLNSCLEVCA------- 519

  Fly 22472 DERGRCTCPIDLGYRLTPRGECQPEEPPECTSNDQCADNRFCNLDTKTCEDPCLTKV--CGVNAF 22534
               |..||          .|........:||..|...|:...|..|...::.|:||.  .|.:|.
 Worm   520 ---GNPTC----------AGANYNRRLGDCTLFDAIDDDAEINEHTDFYKNLCVTKEIDTGASAA 571

  Fly 22535 CNA--VNHRAQCQCITGYTGNPDLHCNH-----TNFRTDFPR-PDMVVS---------------C 22576
            .|.  ..||.....:.|......|....     |...|:..| |:..|.               |
 Worm   572 ANVPETKHRVSGTVVEGKDSKSQLLATKKVKKPTIKNTEHRRAPESTVPIGPPVEVKAEAIQTIC 636

  Fly 22577 LADGVQVEIHITEPGFNGVLYVKGHSKDEECR---------------------RVVNL------- 22613
            ..:|::|:|:..|| |:||::||  :|.:.||                     |.::|       
 Worm   637 NYEGIKVQINNGEP-FSGVIFVK--NKFDTCRVEVANSNAATLVLGLPKDFGMRPISLDNIDDNE 698

  Fly 22614 -------AGETVP---RTEIFR-----VHFGSCGM-QAVKDVASFVLVIQKH----PKLVTYKAQ 22658
                   .||..|   ..|.||     ..|..||: ..:.......:|||.:    |.|||...|
 Worm   699 TGKNKTKKGEETPLKDEIEEFRQKRQAAEFRDCGLVDLLNGTYKSTVVIQTNNLGIPGLVTSMDQ 763

  Fly 22659 AYNIKCVYQT--GEKNVTLGFNVSMLTTAGTIANTGPP--------PICQMRIITNEGEE--INS 22711
            .|.:.|.|.:  |.: |..|:|   :|..|..||...|        |:. |:::..:|.|  :..
 Worm   764 LYEVSCDYSSMLGGR-VQAGYN---MTVTGPEANLIQPRGKIELGNPVL-MQLLNGDGTEQPLVQ 823

  Fly 22712 AEIGDNLKLQVDV----------------EPATIYGGFARSCIAKTMEDNVQNEYLVTDENGCAT 22760
            |::||.|:|:.::                ||. :.||.|.:           .|.|...:.||.|
 Worm   824 AKLGDILELRWEIMAMDDELDFFVKNCHAEPG-VAGGKAGA-----------GEKLRLIDGGCPT 876

  Fly 22761 ----DTSIFGNWEYNPDTNSLLASFNAFKFPSSDNIRFQCNIRVCFGRCQPVNC---GGY-NAFG 22817
                ...|.|..|....... .....||:|.||.:||..|.:.:|.|.|:||.|   ||. .:||
 Worm   877 PAVAQKLIPGAIEIKSSAVK-TTKMQAFRFDSSASIRVTCEVEICKGDCEPVECALTGGVKKSFG 940

  Fly 22818 RRRRSIADN----STDATAI-----ATNSGVEGQLREEITISSNAILTFEKRSGQGL--NDANIK 22871
            |::|.:::|    .|:...|     ||.|.|.....:::....|..:...:.|...|  .||:  
 Worm   941 RKKREVSNNIEEFETNRYLIPRRSHATTSIVIIDPLQQVCTKVNEPVAMSRASTLDLLREDAH-- 1003

  Fly 22872 PAAQRVED--ICVSMV------GLIIALVI--TALLALVAV 22902
             ..|.:|:  ||::.|      |.:..|::  |.::|..||
 Worm  1004 -EVQMIEEGSICLNSVTVFAIFGTLAVLILGQTVVIAHYAV 1043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579 81/317 (26%)
Zona_pellucida <22714..22810 CDD:278526 30/115 (26%)
noah-1NP_001250022.1 PAN_AP_HGF 107..189 CDD:238532 13/97 (13%)
PAN_AP_HGF 201..282 CDD:238532 11/84 (13%)
PAN_AP_HGF 295..379 CDD:238532 19/124 (15%)
PAN_AP_HGF 391..473 CDD:238532 23/130 (18%)
PAN_APPLE 485..557 CDD:294081 18/94 (19%)
Zona_pellucida <818..920 CDD:278526 27/114 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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