DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and COL6A3

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_004360.2 Gene:COL6A3 / 1293 HGNCID:2213 Length:3177 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
COL6A3NP_004360.2 Nonhelical region 26..2038
vWFA 38..203 CDD:320736
vWFA 241..405 CDD:320736
vWA_collagen_alpha3-VI-like 444..608 CDD:238758
vWA_collagen_alpha3-VI-like 638..802 CDD:238758
vWFA 836..999 CDD:320736
vWFA 1028..1191 CDD:320736
vWA_collagen_alpha3-VI-like 1232..1394 CDD:238758
vWA_collagen_alpha3-VI-like 1435..1599 CDD:238758
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1612..1634
VWA 1639..1811 CDD:306576
VWA 1838..1994 CDD:214621
Triple-helical region 2039..2375
Cell attachment site 2040..2042
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2041..2369
Collagen 2080..2133 CDD:189968
Collagen 2110..2172 CDD:189968
Cell attachment site 2136..2138
Cell attachment site 2148..2150
Cell attachment site 2154..2156
Collagen 2183..2292 CDD:189968
Collagen 2270..2338 CDD:189968
Collagen 2314..2371 CDD:189968
Cell attachment site 2370..2372
Nonhelical region 2376..3177
VWA 2403..2580 CDD:306576
VWA 2619..2806 CDD:306576
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2859..2890
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2957..2986
FN3 2993..3061 CDD:214495
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3073..3093
Kunitz_BPTI 3111..3162 CDD:278443
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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