DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and Ppp1r12a

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_006241370.1 Gene:Ppp1r12a / 116670 RGDID:620013 Length:1070 Species:Rattus norvegicus


Alignment Length:885 Identity:187/885 - (21%)
Similarity:304/885 - (34%) Gaps:246/885 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  4475 HSEKTTESTRDVPTTRPFEASTPSSASLETTVPSVTLETTTNVPIGSTGGQVTEQTTSSPSEVRT 4539
            ||||..:.:       |...||   |::|...|..|.:....:.|             .|.  :.
  Rat   291 HSEKRDKKS-------PLIEST---ANMENNQPQKTFKNKETLII-------------EPE--KN 330

  Fly  4540 TIRVEESTLPSRSADRTTLSESPETPTTLPSDFTIRPHSEQTTESTRDVPT-TRPFEAST-PSPA 4602
            ..|:|  :|....||.....:..|:..:...|......||..|:.|:.:.: |....||| .:||
  Rat   331 ASRIE--SLEQEKADEEEEGKKDESSCSSEEDEEDDSESEAETDKTKPMASVTNAHTASTQAAPA 393

  Fly  4603 SLETTVPSVTSETTTNVPIGSTGGQVTGQTTAPPSEFRTTIRVEESTLPSRSTDRTTPSES-PET 4666
            ::  |.|:::|.              .|..|:|..:|...    .|.:|..|.|..:..:. .:|
  Rat   394 AV--TTPTLSSN--------------QGTPTSPVKKFDFI----ASLMPVESVDPASWRQGLRKT 438

  Fly  4667 PTIL-PSDSTTRTYSDQTTESTRDVPTTRPFEASTPSPASLETTVPSVTLETTTNVPIGSTG--G 4728
            ..:| ||......:...||:.     :.:..|....||||             ..:.:..||  |
  Rat   439 GIVLVPSKGEKSMFPTSTTKI-----SPKEEERKDESPAS-------------WRLGLRKTGSYG 485

  Fly  4729 QVTEQTTSSPS----EVRTTIRVEESTLPSRSADRTTPSE----------SPETPTTL--PSDFI 4777
            .:.|.|.|..:    :....||...|...|.|.|.....:          :|..|..|  .||..
  Rat   486 ALAEITASKEAQKEKDTAGVIRSASSPRLSSSLDNKEKEKDNKGTRLAYVAPTIPRRLGSTSDIE 550

  Fly  4778 TRPHSEKTTESTRDVPTTRPFEASTPSSASLETTVPSVTLETTTNVPIGSTGGQVTE-------Q 4835
            .:.:.|.:...|....|.|.:|.....::|:.        |.:|.....|.|.:..:       .
  Rat   551 EKENRESSNLRTSSSYTRRKWEDDLKKNSSIN--------EGSTYHRSCSFGRRQDDLISCSVPS 607

  Fly  4836 TTSSPSEVRTTIRVEESTLPSRSADRTTPSESPETPTTLPSDFITRPHSEKTTESTRDVPTTRPF 4900
            |||:|: |.:...:::|.|.|.|....||..|  :|....|....|..:|.:||..:|       
  Rat   608 TTSTPT-VTSAAGLQKSFLSSTSTTAKTPPGS--SPAGTQSSTSNRLWAEDSTEKEKD------- 662

  Fly  4901 EASTPSSASLET--TVPSVTLETTTNVPIGSTGGQVTEQTTSSPSEVR-------TTIRVEESTL 4956
              |.|::|::..  ||.|....:||.:...:.|      |.||.||||       |.:|.|||..
  Rat   663 --SAPTAATIPVAPTVVSAAASSTTALTTTTAG------TLSSTSEVRERRRSYLTPVRDEESES 719

  Fly  4957 PSRSTDRTTPSESPETPTTLPSDFTTRPHSEQTTESTRDVPTTRPFEASTPSPASLETTVPSVTL 5021
            ..::..|                     .:.|:..||:.|..|...||        |.|:     
  Rat   720 QRKARSR---------------------QARQSRRSTQGVTLTDLQEA--------EKTI----- 750

  Fly  5022 ETTTNVPIGSTGGQVTEQTTSSPSEVRTTIRVEESTLPSRSADRTTPSESPETPTTLPSDF---I 5083
                       |...:.:|....:|       |:........|:....|..|:..:...::   .
  Rat   751 -----------GRSRSTRTREQENE-------EKDKEEKEKQDKEKQEEKKESEVSREDEYKQKY 797

  Fly  5084 TRTYSDQTTESTRDVPTTRPFEASTPSPASLETTVPSVTSETTTNVP---IGSTGG--------- 5136
            :||| |:|....|.|.|:   .:||||.:||.|...|:.:.:..|.|   :|.|..         
  Rat   798 SRTY-DETYARYRPVSTS---SSSTPSSSSLSTLGSSLYASSQLNRPNSLVGITSAYSRGLTKDN 858

  Fly  5137 ---------QVTGQTTAPPSEFRTTIRVEESTLPSRST--------------DRTTPSESPETPT 5178
                     :..|:..:.|...|...|..|.   .|||              :|.:.:|...:..
  Rat   859 EREGEKKEEEKEGEDKSQPKSIRERRRPREK---RRSTGVSFWTQDSDENEQERQSDTEDGSSKR 920

  Fly  5179 TLPSDFTTRPHSDQTTESTRDVPTTRPFEASTPSPAS---LETTVP-SVTLETTTNVPIGSTGGQ 5239
            ...:|..:|..|..|:.|.|       :::.....||   ||...| ...||...:........|
  Rat   921 DTQTDSVSRYDSSSTSSSDR-------YDSLLGRSASYSYLEERKPYGSRLEKDDSTDFKKLYEQ 978

  Fly  5240 VTEQTTSSPSEVRTT--------IRVEEST-LPSRSADRT 5270
            :..:.....:::..|        :::|::| ...|.|||:
  Rat   979 ILAENEKLKAQLHDTNMELTDLKLQLEKATQRQERFADRS 1018

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395 45/206 (22%)
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572 20/98 (20%)
DUF4758 4581..4754 CDD:292572 39/182 (21%)
DUF4758 4683..4847 CDD:292572 39/188 (21%)
DUF4758 4785..4964 CDD:292572 49/194 (25%)
DUF4696 4841..5385 CDD:292395 104/490 (21%)
DUF4758 4887..5098 CDD:292572 47/222 (21%)
DUF4758 5193..5371 CDD:292572 18/91 (20%)
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
Ppp1r12aXP_006241370.1 Ank_2 47..136 CDD:289560
ANK 67..252 CDD:238125
ANK repeat 72..103 CDD:293786
ANK repeat 105..136 CDD:293786
ANK repeat 138..229 CDD:293786
Ank_4 199..252 CDD:290365
ANK 226..>301 CDD:238125 4/16 (25%)
ANK repeat 231..262 CDD:293786
Ank_4 232..280 CDD:290365
PRKG1_interact 971..1069 CDD:292521 8/48 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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