DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and Ltbp4

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_783572.2 Gene:Ltbp4 / 108075 MGIID:1321395 Length:1666 Species:Mus musculus


Alignment Length:1461 Identity:408/1461 - (27%)
Similarity:512/1461 - (35%) Gaps:511/1461 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 CKQRP--CDVFAHCTNTLGSFTCTCFPGYR--GNGFHCEDIDECQ---DPAIAARCVENAECCNL 190
            |::.|  |.. ..|......:||.|.||:|  ..|..|.|||||:   .|....||.      |.
Mouse   592 CQRNPQVCGP-GRCVPRPSGYTCACDPGFRLGPQGTRCIDIDECRRVPTPCAPGRCE------NT 649

  Fly   191 PAHFLCKCKDGYE-GDGEVLCTDVDECRN-PENCGPNALCTNTPGNYTCSCPDGYVGNNPYREGC 253
            |..|.|.|..|:: |.....|.||||||. |..| ....|.||||::.|.||.||.. .|:...|
Mouse   650 PGSFRCVCGTGFQAGPRATECLDVDECRRVPPPC-DRGRCENTPGSFLCVCPAGYQA-APHGASC 712

  Fly   254 QDVDECSY-PNVCGPGAICTNLEGSYRCDCPPGYDGDGRSESGCVDQDECAR--TPCGRNADCLN 315
            ||||||:. |.:||.| :|.||.||:||.||.|:.|....|    |.||||:  .|||... |.|
Mouse   713 QDVDECTQSPGLCGRG-VCENLPGSFRCVCPAGFRGSACEE----DVDECAQQPPPCGPGR-CDN 771

  Fly   316 TDGSFRCLCPDGY-SGDPMNGCEDVDECATN-NPCGLGAECVNLGGSFQCRCPSGFVLEHDPHAD 378
            |.|||.|.||.|: |..|...|:|||||:.: :||..| .|.|..|||:|.||:||         
Mouse   772 TAGSFHCACPAGFRSRGPGAPCQDVDECSRSPSPCAYG-RCENTEGSFKCVCPTGF--------- 826

  Fly   379 QLPQPLNTQQLGYGPGATDIAPYQRTSGAGLACLDIDECNQPDGVAKCGTNAKCINFPGSYRC-L 442
               ||                     :.||..|.|:|||   :....| ...:|:|.|||::| .
Mouse   827 ---QP---------------------NAAGSECEDVDEC---ENRLAC-PGQECVNSPGSFQCRA 863

  Fly   443 CPSGFQGQGYLH---CENINECQD-NPCGENAICTDTVGSFVCTCKPDY---TGDPFRGCVDIDE 500
            ||.|.    :||   |.:::||.. .|||.:..||:|.|||.|:|...|   :|.| ..|.||:|
Mouse   864 CPVGH----HLHRGRCTDVDECSSGTPCGLHGQCTNTKGSFHCSCSTGYRAPSGQP-GPCADINE 923

  Fly   501 CTALDKPCGQHAVCENTVPGYNCKCPQGYDGKPDPKVACEQVDVNILCSSNFDCTNNAECIENQC 565
            |...|. |..|..|.||...:.|.|..||  :|.|:                             
Mouse   924 CLEGDF-CFPHGECLNTDGSFTCTCAPGY--RPGPR----------------------------- 956

  Fly   566 FCLDGFEPIGSSCVDIDECRTHAEVCGPHAQCLNTPGSYGCECEAGYVGSPPRMACKQPCEDVRC 630
                     |:||:|:||| :..::| ....|.||.||:.|.|..|:                |.
Mouse   957 ---------GASCLDVDEC-SEEDLC-QSGICTNTDGSFECICPPGH----------------RA 994

  Fly   631 GAHAYCKPDQNEAYCVCEDGWTYNPSDVAAGCVDIDECDVMHGPFGSCGQNATCTNSAGGFTCA- 694
            |      ||                   .|.|:|||||. ..|| ..|| :..|.||.|.:.|. 
Mouse   995 G------PD-------------------LASCLDIDECR-ERGP-ALCG-SQRCENSPGSYRCVR 1031

  Fly   695 -CPPGFSGDPHSKCVDVDECRT-GASKCGAGAECVNVPGGGYTCRCPGNTIADPDPSVRCVPIVS 757
             |.||:...|...|.|:||||. |::.||| ..|.|.||                 |.||.|  :
Mouse  1032 DCDPGYHPGPEGTCDDIDECREYGSAICGA-QRCENTPG-----------------SYRCTP--A 1076

  Fly   758 CSANEDCPGNSICDATKRCLCPEPNIGNDCRHPCEALN---CGAHAQCMLANGQAQCLCAPGYTG 819
            |.     ||.            :|..|..|:...|..|   |||||.|....|..||:|..||.|
Mouse  1077 CD-----PGY------------QPTPGGGCQDVDECRNRSFCGAHAMCQNLPGSFQCVCDQGYEG 1124

  Fly   820 NSALAG-GCNDIDECRA--NPCAEKAICSNTAGGYLCQCPGG-SSGDPYREGCITSKTVGCSDAN 880
              |..| .|.|::||..  ..|. .|:|.|..|.:||.||.. ...||....|:..:.       
Mouse  1125 --ARDGRHCVDVNECETLQGVCG-SALCENVEGSFLCVCPNSPEEFDPMTGRCVPPRA------- 1179

  Fly   881 PCATGETCVQDSYTGNSV-------------CICRQGYERNSENGQCQDVDECSVQRGKP-ACGL 931
            |..|.......:....|:             ...|||...:...       ||......| ||. 
Mouse  1180 PAGTFPGSQPQAPASPSLPARPPAPPPPRRPSPPRQGPVSSGRR-------ECYFDTAAPDACD- 1236

  Fly   932 NALCKNLPGSYECRCPQGHNGNPFIMCEICNTPECQCQSPYKLVGNSCVLSGCSSGQACPSGAEC 996
            |.|.:|:... ||.|..|....                            |||.. |.|| |.| 
Mouse  1237 NILARNVTWQ-ECCCTVGEGWG----------------------------SGCRI-QQCP-GTE- 1269

  Fly   997 ISIAGGVSYCACPKGYQTQPDGSCV---DVDECEERGAQLCAFGAQCVNKPGSYSCHCPEGYQGD 1058
              .|...|.|...:||.. |.|...   |||||:....|:|..|. |||....|||:|..|:...
Mouse  1270 --TAEYQSLCPHGRGYLV-PSGDLSARRDVDECQLFQDQVCKSGV-CVNTAPGYSCYCSNGFYYH 1330

  Fly  1059 AYNGLCALAQRKCAADRECAANEKCIQPGECVCPPPYFLDPQDNNKCKSPCERFPCGINAKCTPS 1123
            |:.                                                              
Mouse  1331 AHR-------------------------------------------------------------- 1333

  Fly  1124 DPPQCMCEAGFKGDPLLGCTDEDECS-HLPCAYGAYCVNKKGGYQCVCPKDYTGDPYKSGCIFES 1187
                            |.|.|.|||: ..|...|..|||..|.|.|.|......|..:..|:   
Mouse  1334 ----------------LECVDNDECADEEPACEGGRCVNTVGSYHCTCEPPLVLDGSRRRCV--- 1379

  Fly  1188 GTPKSKCLSNDDCASNLACLEGSC---VSPCSSLLCGSNAYCETEQHAGWCRCRVGYVKNGDGDC 1249
               .::..|.||   ||    |.|   |.|  .|:|...   ..::.|.:..|...|.:....||
Mouse  1380 ---SNESQSLDD---NL----GVCWQEVGP--DLVCSRP---RLDRQATYTECCCLYGEAWGMDC 1429

  Fly  1250 -VSQCQDVICGDG--ALC---IPTSEGPTCKCPQGQLGNPFPGGSCSTDQCSAARPCGERQICIN 1308
             :...||   .|.  |||   .|.:.||           |.|||                     
Mouse  1430 ALCPAQD---SDDFEALCNVLRPPAYGP-----------PRPGG--------------------- 1459

  Fly  1309 GRCKERCEGVVCGIGATCDRNNGKCICEP--NFVGNPDLICMP--PIEQAKCSPGCGENAHCEYG 1369
                       .||    ....|..|..|  :....|||...|  |.:.....||........||
Mouse  1460 -----------FGI----PYEYGPDIGPPYQSLPYGPDLYPPPVLPYDPYPPPPGPFARREAPYG 1509

  Fly  1370 ---------------LGQSRCACNP------------------------------GTFGNPYEGC 1389
                           .|:|.....|                              |....||||.
Mouse  1510 APPFDMPDFEDDGGPYGESETPDPPSRGTGWPYRSRDTRGSFPEPEESSERGSYTGALSEPYEGL 1574

  Fly  1390 GAQSKNVCQPNSCG-----PNAECRAVGNHISCLCPQGFSGN-PYIGCQDVDEC----ANKPCGL 1444
            .|:        .||     |:..|..|....:|.|..|:..: ..:.|.||:||    |..|..:
Mouse  1575 EAE--------ECGILDGCPHGRCVRVPEGFTCDCFDGYRLDITRMSCVDVNECDEAEATSPLCV 1631

  Fly  1445 NAACLNRAGGFECLCLSGHA--GNPYSSCQP 1473
            ||.|:|..|.|.|:|..|.|  ..|: .|.|
Mouse  1632 NARCVNTDGSFRCICRPGFAPTHQPH-HCAP 1661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 10/32 (31%)
EGF_CA 212..247 CDD:238011 18/35 (51%)
EGF_CA 255..>286 CDD:214542 18/31 (58%)
EGF_CA 298..331 CDD:238011 19/35 (54%)
EGF_CA 338..373 CDD:238011 18/35 (51%)
EGF_CA 413..456 CDD:238011 16/46 (35%)
EGF_CA 457..490 CDD:238011 14/36 (39%)
EGF_CA 497..>529 CDD:214542 12/31 (39%)
EGF_CA 580..>612 CDD:214542 12/31 (39%)
EGF_3 676..702 CDD:289699 10/27 (37%)
EGF_CA 1022..1056 CDD:214542 16/33 (48%)
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
Ltbp4NP_783572.2 EGF_CA 356..>386 CDD:214542
TB 417..452 CDD:279073
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 473..590
cEGF 610..633 CDD:289433 10/22 (45%)
EGF_CA 630..666 CDD:214542 15/41 (37%)
EGF_CA 672..713 CDD:214542 19/42 (45%)
EGF_CA 714..751 CDD:238011 20/37 (54%)
EGF_CA 753..787 CDD:238011 18/34 (53%)
EGF_CA 795..836 CDD:214542 22/74 (30%)
EGF_CA 877..909 CDD:238011 13/31 (42%)
EGF_CA 920..956 CDD:214542 15/38 (39%)
EGF_CA 962..997 CDD:214542 15/58 (26%)
EGF_CA 1003..1041 CDD:214542 17/40 (43%)
EGF_CA 1091..1132 CDD:214542 17/42 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1171..1221 7/56 (13%)
TB 1235..1272 CDD:279073 16/71 (23%)
EGF_CA 1338..>1367 CDD:238011 13/28 (46%)
TB 1403..1439 CDD:279073 8/41 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1488..1566 8/77 (10%)
EGF_CA 1616..>1650 CDD:214542 14/33 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11570
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D4721at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43451
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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