DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and si:ch73-380l3.4

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_017206719.1 Gene:si:ch73-380l3.4 / 101885005 ZFINID:ZDB-GENE-131125-97 Length:517 Species:Danio rerio


Alignment Length:611 Identity:112/611 - (18%)
Similarity:186/611 - (30%) Gaps:194/611 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly 22394 MICECLEGYTGNPAVQCDKRSLCV----IEKGFVRDVDGQCVCPPGTALDIYEYCTPCREEQGFR 22454
            |:..|...||.||..:.||   .|    :..|:      ..||.|..:.::.:   ..|......
Zfish    38 MVIPCSFSYTTNPPTKPDK---VVWYQWVSSGY------PLVCDPSNSNNVID---KFRGRTSLY 90

  Fly 22455 IDESGHC---VCALERGMVIDERGRCTCPIDLGYRL--------TPRGECQPEEPP-ECTSNDQC 22507
            ...||.|   :..||:....::......|.::|:|.        |.|.:.:|:.|. .....::.
Zfish    91 GGSSGACSLLIKNLEQSHHGEKIYAWIDPDNIGWRTYKFYDVTSTIRVDARPQLPSISIFGGEKM 155

  Fly 22508 ADNRFCNLDTKTCEDPCLTKVCGVNAFC---------NAVNHRAQCQCITGYTGNPDLHCNHTNF 22563
            .|.              :|..|..:..|         |.:....|    |....:.|..|.....
Zfish   156 GDK--------------ITVTCSASHTCPYSIPRIILNGIEGSDQ----TNGDCSSDGQCRIALT 202

  Fly 22564 RTDFPRPDMVVSCLADGVQVEIHITEPGFNGVLYVKGHSKDEEC-RRVVNLAGETVPRTEIFRVH 22627
            ||      .||.  |:....|..:|..|...|...|..|  .|| .:.:.:..|.|..||..:.:
Zfish   203 RT------AVVK--AENTTFECSVTHDGGTTVTATKRQS--SECVHQKITVEPEIVEVTEGIKQN 257

  Fly 22628 F-----GSCGMQAVKDVASFVLVIQKHPKLVTYKAQAYNIKCVYQTGEKNVTLGFN---VSMLTT 22684
            |     .||               |:....:|:..:...:    .||.|.|: ||:   .|.::.
Zfish   258 FTCNVYHSC---------------QRENPTITWNYENMQV----STGSKIVS-GFDRVTYSSISF 302

  Fly 22685 AGTIANTGPPPICQMRIITNEGEEINSAEIGDNLKLQ-----VDVEPATIYGGFARSCIAKTMED 22744
            .||..:.|....|..::   .|..|   |....|::|     :.:||.          ||:..| 
Zfish   303 LGTTEDHGKKLKCTAKV---SGRNI---EASVALRVQCVHRNITIEPE----------IAEITE- 350

  Fly 22745 NVQNEYLVTDENGCATDTSIFGNWEYN----PDTNSLLASFNAFKFPSSDNIRFQCNIRVCFGRC 22805
            .|:..:..|..:.|..:.... .|.|.    .:....|:.|:...:   ..|.|           
Zfish   351 GVEQNFTCTVHHSCQKENPTI-TWNYENMQVSEGRQTLSGFDRVVY---STITF----------- 400

  Fly 22806 QPVNCGGYNAFGRRRRSIADNSTDATAIATNSGVEGQLREEITI-SSNAILTFEKRSGQGLNDAN 22869
                .|.....|::            .|.:.:...|.:.|.:.: ..:.|||..|.:|       
Zfish   401 ----LGAKEDHGKK------------LICSAAFSRGNITESVVLYLQHPILTVLKTTG------- 442

  Fly 22870 IKPAAQRVEDICVSMVGLIIALVITALLALVAVAVAVSCWLMAYRRRPKTIA----PLPHPPEFP 22930
                                ..::|..|..:...|.....:...|.|.|..:    ..|..|..|
Zfish   443 --------------------LYILTPSLVFLLACVIAGVIICKRRHRSKDASFVSGSKPFKPHMP 487

  Fly 22931 NPLFSNPDAVP----------EPTPD 22946
            :|. |:|.::.          |..||
Zfish   488 SPK-SDPKSMSGNDYEIYNNMEEDPD 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579 48/252 (19%)
Zona_pellucida <22714..22810 CDD:278526 16/104 (15%)
si:ch73-380l3.4XP_017206719.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4475
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.