DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and CG42818

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:NP_001188821.1 Gene:CG42818 / 10178877 FlyBaseID:FBgn0262000 Length:1085 Species:Drosophila melanogaster


Alignment Length:1114 Identity:235/1114 - (21%)
Similarity:372/1114 - (33%) Gaps:308/1114 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  4356 ESPETPTTLPSDFTTRPHSEQTTES-----------TRDVPTT-RPFEASTPS-------PASLE 4401
            :||:...|    |.|..|:...|:|           .:|..|. :...||.|.       |.::|
  Fly    71 DSPKYDKT----FHTEIHANNETDSQELENIILEKNLQDSKTEFQENRASQPKNMHSFQIPEAIE 131

  Fly  4402 TTVPSVTLETTTNVPIGSTGGQVTG--QTTSSPSEVRTTIRVEESTLPSRSADRTTPSESPETPT 4464
            :...:..|:...::..|......:|  |..|.|..||..    .|.|..:.|         |...
  Fly   132 SHFNNKELQNENDLHKGLKQQYRSGSEQDKSGPENVREI----ASKLILQWA---------ENQR 183

  Fly  4465 TLPSDF------ITRPHSEKTTE----STRDVPTTRPF------------EASTPSSASLETTVP 4507
            :|...|      :.:.|..|...    |.||:...:..            |.||.:.|.:   |.
  Fly   184 SLLDSFVKAITDVLKVHDSKLNMKINISPRDIMILKDMLKQLLESIMQLREGSTSTRARI---VL 245

  Fly  4508 SVTLETTTNVPIGSTGGQVTEQTTSSPSEVRTTIRVEESTLPSRSADRTTLSESPETPTTLPSDF 4572
            :..:||..:: |.|. .|..:.|..:...:.....|.|:...:.......||:....|||..|. 
  Fly   246 NKWIETQKSL-IDSF-SQAIQNTNQNVDNIANVYEVMENLNKNLRELVILLSDKESFPTTESSS- 307

  Fly  4573 TIRPHSEQTTE---STRDVPTTRPFEASTPSPASLETTVPSVTSETTTNVPIGSTGGQVTGQTTA 4634
                 |:|||.   :|....|:..|.::.|           :..|....|.|  .|..:.|..  
  Fly   308 -----SQQTTSIYATTTFYLTSSTFGSTHP-----------IVDENINRVNI--MGNLIKGLR-- 352

  Fly  4635 PPSEFRTTIRVEESTLPSRSTDRTTPSES---PETPTILPSDSTTRTYSDQTTESTRDVPTTRPF 4696
                 ...::::|:...|.||..||...:   |.|.|.|.::.||    ...|.||.:|......
  Fly   353 -----NIMVQMDETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTT----SHPTTSTYEVTNIITD 408

  Fly  4697 EASTPSPASL----------------ETTVPSVTLETTTNVPIGST---GGQVTEQ--TTSSPSE 4740
            |:......:|                .|:..|:|.::.:..|..:|   .|.:|..  ||:||..
  Fly   409 ESKIKDMFNLIKGIEDLISQYNGKHKFTSTTSLTGKSNSREPTMTTYSSAGGITSHSFTTTSPKT 473

  Fly  4741 VRTTIRVEESTLPSRSADRTTPSESPETPTT---------------------------LPSDFIT 4778
            |.|            |:..:|...||..|||                           |...|..
  Fly   474 VTT------------SSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIKELKGLIEHFSD 526

  Fly  4779 RPHSEKTTESTRDVPTTRPFEASTPSSASLETTVPSVTLETTTNVP-IGSTGGQVTE--QTTSSP 4840
            ..:...||.||.|..:.:| .|:||.|....::.|....|:||:.. :.||   :|.  .|.|:.
  Fly   527 TKNITSTTYSTGDSKSFQP-TATTPDSTDRSSSQPITFPESTTSTTNLQST---ITNHLSTESTS 587

  Fly  4841 SEVRTTIRVEESTLPSRSA------DRTTPSESPETPTTLP--SDFITRPHSEKTTESTRDVPTT 4897
            |::.||:.:..:|.|:.:.      |:....:|......:.  ||.:...:.:...:||..:.|.
  Fly   588 SQLNTTLSITGTTTPNLTTSTHDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQLTTE 652

  Fly  4898 RPFEASTPSSASLETTVPSVTLETTTNVPIGSTGGQVT-EQTTSSPSEVRTTIRVEESTLPSRST 4961
            ..|.:|...:.|  |||.|.|..||.::.|.||....| |.|....::|       |:..|..|.
  Fly   653 STFNSSINITNS--TTVASSTFSTTESMAIHSTPYLSTREITVFQFNDV-------ENINPIISN 708

  Fly  4962 DRTTPSESPETPTTLPSDFTTRPHSEQTTESTRDVPTTRPFEASTPSPASLETTVPSVTLETTTN 5026
            :.||              .||..||...|.||.|..|:.|         :|.||..|.|.::|. 
  Fly   709 NSTT--------------VTTNIHSSTYTTSTTDNTTSYP---------NLSTTESSPTFDSTI- 749

  Fly  5027 VPIGSTGGQVTEQTTSSPS---------EVRTTIRVEESTLPSRSADRTTP---SESPETPTTLP 5079
                 :....:.||.|..|         |:...:|..:.||..:|..:.:|   |........:.
  Fly   750 -----SHSNTSSQTRSLGSYKDKIKNIVELLKKLRKIQKTLADKSKGQLSPMLISRIKAVLKQIV 809

  Fly  5080 SDFITRTYSDQTTESTRDVPTTRPFEASTPSPAS----------------LETTVPSVTSETTTN 5128
            :..|.....|.|........|..|.|.:|.....                |:.::.|.|..||.|
  Fly   810 AGNIDSVNGDSTELEILLSTTVNPNEDTTDLTMEKLLKLFDDFERMYNVLLDDSIQSTTQSTTQN 874

  Fly  5129 VPIGSTGGQVTGQT-----TAPPSEFRTTIRVEESTLPSRSTDRTTPSESPETPTTLPSD----- 5183
            ..|.||.......|     |..|:::..|     |:.|:.||  |:.|.:|.:...|.||     
  Fly   875 NTIFSTTYSTIFSTTQSISTTSPTQYALT-----SSTPNTST--TSHSSTPSSINNLRSDESNNH 932

  Fly  5184 ------------------FTTRPHSDQTTESTRDVPTTRPFEASTPSPASLETTVPSVTLETTTN 5230
                              :..:...::..|....:...:|.:..|.:.|...|....|:.|.   
  Fly   933 QPIVDAIQQLKMALYHDFYAFKKSQEERMEKILQLLNGKPIDRRTKTIAKPRTIRKKVSREI--- 994

  Fly  5231 VPIGSTGGQVTEQTTSSPSEVRTTIRVEESTLPSRSADR--TTPSESPETPTLPSDFTTRPHSEQ 5293
                        |..:|.        |:|..:....||:  ..|....:...:|     :|....
  Fly   995 ------------QKRNSD--------VKEDKIHHYKADKFIKNPKNGNQDSHIP-----KPILNS 1034

  Fly  5294 TTESTRDVP 5302
            .....:|||
  Fly  1035 ARSKIKDVP 1043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395 78/370 (21%)
DUF4758 4275..4448 CDD:292572 25/112 (22%)
DUF4758 4377..4574 CDD:292572 47/239 (20%)
DUF4758 4581..4754 CDD:292572 42/199 (21%)
DUF4758 4683..4847 CDD:292572 49/214 (23%)
DUF4758 4785..4964 CDD:292572 51/190 (27%)
DUF4696 4841..5385 CDD:292395 110/529 (21%)
DUF4758 4887..5098 CDD:292572 55/223 (25%)
DUF4758 5193..5371 CDD:292572 19/112 (17%)
DUF4758 5294..5487 CDD:292572 3/9 (33%)
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
CG42818NP_001188821.1 PHA03255 642..>763 CDD:165513 44/158 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.