DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and thbs2a

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_009305765.1 Gene:thbs2a / 100535241 ZFINID:ZDB-GENE-020708-2 Length:1175 Species:Danio rerio


Alignment Length:959 Identity:216/959 - (22%)
Similarity:282/959 - (29%) Gaps:404/959 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KTNLRANSRFRGEVFYLNLENGYF-------------GCQ---------VNESTEYLQL-FNLSK 72
            |.::|.| .|||     .|:|..|             ||:         ||||||.:.: .::|.
Zfish   198 KGSIREN-HFRG-----LLQNVQFLFDTPIENILRNKGCEIAKPEEVNVVNESTESVSVGTSIST 256

  Fly    73 LCDGTQD------CFLGADELS-------------------------------------KELKCT 94
            ...|.::      |....:|||                                     |.:|..
Zfish   257 NFIGEKEKIASDVCERSCEELSNMVQELKGLRIIVGNLIDGLQKVTEENTVMKEVLGNMKNIKDK 321

  Fly    95 NDCDKDG--------------TKCTHGACLNG--VCH--------CN-----DGYGGCNCVDKDE 130
            ..|.:||              ||||   |...  |||        |.     ||.....|:.|| 
Zfish   322 RMCWQDGRLFEDKEDWVVDSCTKCT---CQESKIVCHQITCPPVACASPTFLDGECCPLCLPKD- 382

  Fly   131 NECKQRPCDVFAHCTNTLGSFTCTCFPGYRGNGFHCE-DIDECQDPAIAARCVENAECCNLPAHF 194
            :|....|...:..|       |.||..|.:..|..|: ..:.|..|:|..|     .|.      
Zfish   383 SEDGWSPWSEWTEC-------TVTCGTGTQQRGRSCDATSNPCSGPSIQTR-----RCS------ 429

  Fly   195 LCKCKDGYEGDG-----------EVLC-----TDVDECRNP----------------ENC----- 222
            |.||......||           .|.|     |.:..|.:|                :.|     
Zfish   430 LGKCDSRVRQDGGWSLWSPWSSCSVTCGEGQITRIRHCNSPVPQLGGKDCEGSGRETQKCEAKPC 494

  Fly   223 ---------GPNALCTNTPGNYT------CS----------CPDGYVGNNPYREGCQDVDECSYP 262
                     .|.|:|:.|.|..|      |:          ||...|..|...:....||.| ..
Zfish   495 PIDGAWGPWSPWAVCSVTCGGGTRTRTRVCNSPRPQYGGKKCPGDSVDTNACNKQDCPVDGC-LS 558

  Fly   263 NVCGPGAICTNL-EGSYRC-DCPPGYDGDGRSESGCVDQDECARTP--C---GRNADCLNTDGSF 320
            |.|..|..||:. :||:.| .||.|:.|:|:.   |.|.:||...|  |   |.:..|:|||..|
Zfish   559 NPCFGGVECTSSPDGSWECGPCPLGFRGNGKV---CEDVNECDMVPDLCYKVGDSQRCVNTDPGF 620

  Fly   321 RCL-CPDGYSGDPMNG------------CEDVDEC--ATNNPCGLGAECVNLG----GSFQCRCP 366
            .|| ||..|.|:...|            ||..:.|  .|:| |...|||:.||    ..|:|.| 
Zfish   621 HCLPCPPRYKGNQPFGMGVEAAKLNKQVCEQENPCKEKTHN-CHRSAECIYLGHFSEPMFKCEC- 683

  Fly   367 SGFVLEHDPHADQLPQPLNTQQLGYGPGATDIAPYQRTSGAGLAC-LDIDECNQPDGVAKCGTNA 430
                                 ::||             :|.||.| .|.|....|:....||.| 
Zfish   684 ---------------------KIGY-------------AGDGLICGEDSDLDGWPNQNLVCGAN- 713

  Fly   431 KCINFPGSYRCLCPSGFQGQGYLHCENINECQDNP-CGENAICTDTVGSFVCTCKPDYTGDPFRG 494
                               |.| ||:..| |...| .|:.....|..|.   .|..|...|   |
Zfish   714 -------------------QSY-HCKKDN-CPKLPNSGQEDFDKDGQGD---ACDKDDDND---G 751

  Fly   495 CVD-IDECTALDKPCGQHAVCENTVPGYNC-KCPQGYDGKPDPKVACEQVDVNILCSSNFDCTNN 557
            .:| .|.|..|..|  :....:..:.|..| .||  |:..|                :..|...|
Zfish   752 IMDETDNCPLLYNP--RQFDYDKDLVGDRCDNCP--YEHNP----------------AQIDTDGN 796

  Fly   558 AECIENQCFCLDGFEPIGSSC-VDIDECRTHAEVCGPHAQCLNTPGSYGCECEAGYVGSPPRMAC 621
            .|               |.:| ||||    ..||...:..|   |..|                 
Zfish   797 GE---------------GDACAVDID----GDEVLNENDNC---PYMY----------------- 822

  Fly   622 KQPCEDVRCGAHAYCKPDQNEAYCVCEDGWTYNPSDVAAGCVDIDECDVMHGPFGSCGQNATCTN 686
                           ..||.:...   ||       |...|   |.|.::|.|     :.....|
Zfish   823 ---------------NTDQKDTDM---DG-------VGDQC---DNCPLLHNP-----EQTDSDN 854

  Fly   687 SAGGFTCACPPGFSGDPHSKCVDVDEC-------RTGASKCGAGAECVN------VPGGGYTCR- 737
            ...|..|........|.|..  .:|.|       :....|.|.|..|.:      ||.....|| 
Zfish   855 DRVGDECDNNQDIDEDGHQN--SLDNCPYIPNANQADHDKDGKGDACDSDDDNDGVPDDKDNCRL 917

  Fly   738 CPGNTIADPDPSVRCVPIVSCSANEDCPGNSICDATKRCLCPEPNIGND 786
            .|.....|.|...|     ..:..:|...:||.|...  :|||    ||
Zfish   918 VPNKDQRDSDGDGR-----GDACKDDFDNDSIPDFMD--VCPE----ND 955

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 7/28 (25%)
EGF_CA 212..247 CDD:238011 13/80 (16%)
EGF_CA 255..>286 CDD:214542 13/32 (41%)
EGF_CA 298..331 CDD:238011 16/38 (42%)
EGF_CA 338..373 CDD:238011 12/40 (30%)
EGF_CA 413..456 CDD:238011 9/42 (21%)
EGF_CA 457..490 CDD:238011 8/33 (24%)
EGF_CA 497..>529 CDD:214542 9/33 (27%)
EGF_CA 580..>612 CDD:214542 8/31 (26%)
EGF_3 676..702 CDD:289699 3/25 (12%)
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
thbs2aXP_009305765.1 TSPN 30..219 CDD:214560 9/26 (35%)
VWC 324..378 CDD:278520 14/56 (25%)
TSP_1 388..433 CDD:278517 14/62 (23%)
TSP1 443..495 CDD:214559 6/51 (12%)
TSP1 500..552 CDD:214559 11/51 (22%)
EGF_3 655..694 CDD:289699 17/74 (23%)
TSP3 repeat_1C 696..731 CDD:275367 13/56 (23%)
TSP3 repeat_long 732..767 CDD:275366 11/42 (26%)
TSP3 repeat_short 769..790 CDD:275365 6/38 (16%)
TSP_3 792..826 CDD:280556 14/87 (16%)
TSP3 repeat_long 792..826 CDD:275366 14/87 (16%)
TSP3 repeat_short 827..849 CDD:275366 8/39 (21%)
TSP3 repeat_long 850..887 CDD:275365 7/38 (18%)
TSP_3 851..887 CDD:280556 7/37 (19%)
TSP3 repeat_short 888..923 CDD:275366 9/34 (26%)
TSP_3 925..954 CDD:280556 10/39 (26%)
TSP_C 977..1174 CDD:283408
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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