DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and pear1

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_017952446.2 Gene:pear1 / 100489801 XenbaseID:XB-GENE-6045593 Length:1087 Species:Xenopus tropicalis


Alignment Length:962 Identity:262/962 - (27%)
Similarity:320/962 - (33%) Gaps:315/962 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   577 SCVDIDECRTHAEVCGP----------HAQCLNTPGSYGCECEAGYVGSP---PRMACKQPCEDV 628
            ||   |....:.:.|.|          |...|:....|.| |:..|..:.   ||  |.|.|...
 Frog    56 SC---DSSWNYFKACTPQKILYRTAYRHRVKLDYRRRYWC-CKGYYESNDICVPR--CTQECVHG 114

  Fly   629 RCGAHAYCKPDQNEAYCVCEDGWTYNPSDVAAGCVDIDECDVMHGPFGSCGQNATCTNS----AG 689
            ||.|     |||    |.||.||  ...|.::.|    |..|. ||  .|.....|.|:    |.
 Frog   115 RCIA-----PDQ----CQCEPGW--RGKDCSSAC----EAHVW-GP--KCNSTCPCQNNGACDAA 161

  Fly   690 GFTCACPPGFSGDPH-SKCVDVDECRTGAS---KCGAGAECVNVPGGGYTCRCP-GNTIADPDPS 749
            ..||.|||||. ||. .|..|......|.|   :|..||||  .|..| .|.|| |.|  .|...
 Frog   162 SGTCICPPGFR-DPFCEKPCDPGTYGGGCSLSCQCKNGAEC--DPENG-ACLCPEGYT--GPYCE 220

  Fly   750 VRCVPI----VSCSANEDCPGNSICD-ATKRCLCPEPNIGNDCRHPCE----ALNCGAHAQCMLA 805
            :||..:    .|||....|....||: ::..|.||...:|:.|..||.    ..||  ..:|:..
 Frog   221 IRCKEVQPANFSCSDQCLCQSGGICNQSSGECSCPPGWMGSLCSIPCPDGYYGRNC--KQECLCH 283

  Fly   806 NG------QAQCLCAPGYTGNSALAGGCNDIDECR--------ANPCAEKAICSNTA------GG 850
            ||      ..||||:.||||           |.||        ...|:||..|.|..      ||
 Frog   284 NGGQCDPKTGQCLCSEGYTG-----------DHCREECPIGKYGKDCSEKCDCINAVRCYHINGG 337

  Fly   851 YLCQ------------CPGGSSGDPYREGCITS--KTVGC---SDANPCATG-------ETCVQD 891
            .||:            ||.|..|.|....|:..  .:..|   |....|..|       |||...
 Frog   338 CLCEHGFKGEACDERMCPPGLYGMPCNLRCLCDPLHSQSCHPMSGECACKPGWSGLYCNETCPHG 402

  Fly   892 SYTGN--SVCICRQGYERNSENGQCQDVDECSVQRGKPACGLNALCKNLPGSYECRCPQGHNGNP 954
            .|..|  .:|:|..|...:||.|                              ||.|..|..|  
 Frog   403 YYGTNCQELCVCLNGGSCDSETG------------------------------ECICAPGFTG-- 435

  Fly   955 FIMCEICNTPECQCQSPYKLVGNSCVLS-GCSSGQAC-PSGAECISIAG---GVSYCACPK---G 1011
                     |:|....|.:..|..|... ||.:..|| |....|:...|   |.....|||   |
 Frog   436 ---------PQCSSYCPMETYGPKCSQKCGCKNSLACSPIDGSCVCKEGWQKGDCSVPCPKGTWG 491

  Fly  1012 YQTQPDGSCVDVDECEERGAQLCAFGAQCVNKPGSYSCHCPEGYQGDAYNGLC--ALAQRKCAAD 1074
            |      :|....||..        ||.|  .|.|..|.|..|:.||.....|  ......|...
 Frog   492 Y------NCNRTCECNN--------GASC--SPISGLCSCTSGWHGDKCEQPCKDGTFGPGCRQQ 540

  Fly  1075 RECAANEKCIQP--GECVCPPPYFLDPQDNNKCKSPCER----------FPCGINAKCTPSDPPQ 1127
            .||..::.| .|  |:|.|.|.:     ...:||..||.          ..|...|.|:|.| ..
 Frog   541 CECENSDNC-DPITGQCWCLPGW-----TGPECKQSCEEGFWGRKCNMTCDCKNGASCSPKD-GT 598

  Fly  1128 CMCEAGFKGDPLLGCTDEDECSHLPCAYGAYCVNKKGGYQCVCPKDYTGDPYKSGCIFESGTPKS 1192
            |.|.|||:|         .:|.:: |.:|.|      |.:||..           |         
 Frog   599 CTCAAGFRG---------PDCDNI-CPHGRY------GKKCVLT-----------C--------- 627

  Fly  1193 KCLSNDDCASNLACLEGSCVSPCSSLLCGSNAYCETEQHAGW----CR--CRVGYVKNGDGDCVS 1251
            ||.::..|..    ::|||  .|               ..||    |.  |.:|:   ...||.|
 Frog   628 KCSNHSTCNH----IDGSC--KC---------------FPGWKGNDCSEPCTLGF---WGKDCAS 668

  Fly  1252 QCQDVICGDGALCIPTSEGPTCKCPQGQLGNPFPGGSCSTDQCSAARPCGERQICINGRCKERCE 1316
            .|.   |..|..|.|| :| ||.||.|..|.          .||...|.|.    ....|..:|.
 Frog   669 TCN---CQHGGHCSPT-DG-TCICPIGWTGK----------TCSEVCPLGS----YGENCIHKCR 714

  Fly  1317 GVVCGIGATCDRNNGKCICEPNFVGN-PDLICMPPIEQAKCSPGCG--ENAHCEYGLGQSRCACN 1378
               |..||.||...|||.|.|.:.|. .::.|.......||...|.  .||.|.:..|.  |.|.
 Frog   715 ---CQNGAECDHMTGKCSCLPGYHGAFCEIKCPDRTYGLKCHQVCECLNNATCHHVTGS--CQCE 774

  Fly  1379 PGTFGNPYEGCGAQSKNVCQPNSCGPNAECRAVGNHISCLCPQGFSGNPYIG 1430
            ...||...|    :|.||..|.:..||..            |...|..|.||
 Frog   775 AAWFGVHCE----KSLNVEVPFTMVPNTP------------PATDSIGPIIG 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542 8/41 (20%)
EGF_3 676..702 CDD:289699 11/29 (38%)
EGF_CA 1022..1056 CDD:214542 10/33 (30%)
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
pear1XP_017952446.2 EMI 29..97 CDD:400092 10/44 (23%)
exchanger_TraA <147..>310 CDD:411343 60/181 (33%)
exchanger_TraA <416..729 CDD:411343 114/458 (25%)
Laminin_EGF 546..586 CDD:395007 10/45 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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