DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and fbln2

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_017949170.2 Gene:fbln2 / 100487324 XenbaseID:XB-GENE-959371 Length:1029 Species:Xenopus tropicalis


Alignment Length:644 Identity:182/644 - (28%)
Similarity:238/644 - (36%) Gaps:188/644 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VNESTEYLQLFNLSKLCDG-TQD----CFLGADELSKE--------LKCTNDCDKDGTKC----- 104
            :.|..:...::|:|:|.|| |:|    |.....:.|.:        |..:.:|.....:|     
 Frog   407 IEERYDPSHIYNISRLHDGSTKDLVETCCAAGQQWSIDHGECENMPLSASEECRLAEKQCCISYI 471

  Fly   105 THGACLNG-VCHCNDGYGGCNCVDKDENECKQRPCDVFAHCTNTLGSFTCTCFPGYRGNGFHCED 168
            ....|:.| :....||.    |:..:.:.|::....:...|        |:.....|..|..||.
 Frog   472 KENTCIAGMIAAKEDGI----CLPAENDICERSYFKLCCDC--------CSWGLKVRKEGSSCES 524

  Fly   169 IDECQDPAIAARCVENAECCNLPAHFLCKCKDGYE----------GDGEVLC---TDVDEC-RNP 219
            ......|            ||   |.:..|.:|.|          ...|:|.   .|:||| .|.
 Frog   525 NLNLGYP------------CN---HMMILCCNGEEQLIPPDAKIPSKPELLVLPEADIDECVLNT 574

  Fly   220 ENCGPNALCTNTPGNYTC----SCPDGYVGNNPYREGCQDVDECSY-PNVCGPGAICTNLEGSYR 279
            ..|.....|.||.|::.|    .|..|:...|   ..|.|:|||.. .:.|..|..|.|..|||.
 Frog   575 HTCIQGERCVNTVGSFICIQEERCESGFTVVN---GACTDIDECVINRHTCATGERCVNTVGSYI 636

  Fly   280 C----DCPPGY---DGDGRSESGCVDQDECA--RTPCGRNADCLNTDGSFRC-----LCPDGYSG 330
            |    .|..||   ||      .|.|.:|||  ..||.:...|:||.|||.|     .|..||..
 Frog   637 CIQERRCEIGYTLVDG------VCTDINECASLAAPCKQGFTCVNTLGSFVCQRKQLKCNKGYES 695

  Fly   331 DPMNG--CEDVDEC--ATNNPCGLGAECVNLGGSFQCRCPSGFVLEHDPHADQLPQPLNTQQLGY 391
            |. ||  |.|:|||  .|:| |.....|.||.||.:|.|                      ::||
 Frog   696 DE-NGTICIDIDECKLGTHN-CSQEQSCFNLPGSHRCDC----------------------KIGY 736

  Fly   392 GPGATDIAPYQRTSGAGLACLDIDECNQPDGVAKCGTNAKCINFPGSYRCLCPSGFQ-GQGYLHC 455
                       |......||||::||....| ..|  :..|.|..|||:|.|.:||| ||....|
 Frog   737 -----------RYDLFRKACLDVNECWIYPG-RLC--HHTCENTVGSYKCSCFAGFQLGQDGKQC 787

  Fly   456 ENINECQDNPCGENAICTDTVGSFVCTCKPDY-TGDPFRGCVDIDECTALDKPCGQHAV--CENT 517
            |::|||:.|||  |..||:..||:.|.||..| ..|....|.|||||.   :..|...|  |.||
 Frog   788 EDVNECKSNPC--NQECTNVYGSYQCYCKEGYKLADDGISCEDIDECV---QNFGSLCVFACVNT 847

  Fly   518 VPGYNCKCPQ-GYDGKPDPKVACEQVDVNILCSSNFDCTNNAECIENQCFCLDGFEPIGSSCVDI 581
            ...|.|.||: ||           .:.||                             |.:|.||
 Frog   848 PGSYQCACPETGY-----------TLSVN-----------------------------GRTCKDI 872

  Fly   582 DECRTHAEVCGPHAQCLNTPGSYGC---ECEAGYVGSPPRMACKQPCEDVRCGAHAYCK 637
            |||......|....:|.|..|||.|   .|...|     |......||.:.|..:..|:
 Frog   873 DECEVGTHNCSSSEECYNIQGSYKCLSYTCPENY-----RKVSNMVCERISCFNYQECQ 926

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 4/28 (14%)
EGF_CA 212..247 CDD:238011 13/39 (33%)
EGF_CA 255..>286 CDD:214542 13/35 (37%)
EGF_CA 298..331 CDD:238011 16/39 (41%)
EGF_CA 338..373 CDD:238011 14/36 (39%)
EGF_CA 413..456 CDD:238011 17/43 (40%)
EGF_CA 457..490 CDD:238011 15/33 (45%)
EGF_CA 497..>529 CDD:214542 14/34 (41%)
EGF_CA 580..>612 CDD:214542 13/34 (38%)
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
fbln2XP_017949170.2 ANATO 503..546 CDD:412122 13/65 (20%)
EGF_CA 566..603 CDD:214542 13/36 (36%)
EGF_CA 611..648 CDD:214542 14/36 (39%)
EGF_CA 656..698 CDD:214542 17/42 (40%)
EGF_CA 704..745 CDD:311536 17/74 (23%)
cEGF 769..792 CDD:403760 11/22 (50%)
cEGF 808..831 CDD:403760 9/22 (41%)
cEGF 850..874 CDD:403760 12/63 (19%)
EGF_CA 871..>907 CDD:311536 14/40 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.