DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpy and jag1

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_002931784.1 Gene:jag1 / 100486874 XenbaseID:XB-GENE-485662 Length:1218 Species:Xenopus tropicalis


Alignment Length:1173 Identity:280/1173 - (23%)
Similarity:412/1173 - (35%) Gaps:379/1173 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LLSSAVHS---QYSQQPQPFKTNLRANSRFRGEVFYLNLENGY-FGCQVNESTEYLQLFNLSKLC 74
            |:..|:||   ..|:|.|..|.| ...:.|..::..:..|:.| |||              :|.|
 Frog   151 LIDKALHSGMINPSRQWQTLKQN-AGMTHFEYQIRVICDEHYYGFGC--------------NKFC 200

  Fly    75 DGTQDCFLGADELSKELKCTNDCDKDGTK-CTHG----ACLNGVCH--CNDGYGGCNCVDKDENE 132
             ..:|.|.|          ...||::|.| |..|    .|...:|.  |:..:|.|    |...|
 Frog   201 -RPRDDFFG----------HYTCDQNGNKTCLEGWMGPECNKAICRQGCSSKHGTC----KTPGE 250

  Fly   133 CKQRPCDVFAHCTNTLGSFTCTCFPGYRGNGFHCEDIDECQDPAIAARCVENAEC----CNLPAH 193
            |:                    |..|::|.  :|:            :|:.:..|    ||.|..
 Frog   251 CR--------------------CQYGWQGQ--YCD------------KCIPHPGCVHGTCNEPWQ 281

  Fly   194 FLCKCKDGYEGDGEVLCTDVDECRNPENCGPNALCTNT-PGNYTCSCPDGYVGNNPYREGCQDVD 257
            .||:...|    |::...|::.|...:.|.....|:|| |..|.||||:||.|.|     |:..:
 Frog   282 CLCETNWG----GQLCDKDLNYCGTYQPCLNGGTCSNTGPDKYQCSCPEGYSGLN-----CEIAE 337

  Fly   258 ECSYPNVCGPGAICTNLEGSYRCDCPPGYDGDGRSESGCVDQDECARTPCGRNADCLNTDGSFRC 322
            .....:.|..|..|......:.|.|..|:.|...|    ::.|||:..|||....|.:....|:|
 Frog   338 HACLSDPCHNGGSCLETSVGFECQCARGWTGPTCS----INIDECSPNPCGYGGTCQDLVDGFKC 398

  Fly   323 LCPDGYSGDPMNGCE-DVDECATNNPCGLGAECVNLGGSFQCRCPSGFVLEHDPHADQLPQPLNT 386
            :||..::|   ..|: |.:||.. .||.....|.||.||:.|.|..|:                 
 Frog   399 ICPSQWTG---KTCQIDANECEA-KPCVNANSCRNLIGSYYCNCLPGW----------------- 442

  Fly   387 QQLGYGPGATDIAPYQRTSGAGLAC-LDIDECNQPDGVAKCGTNAKCINFPGSYRCLCPSGFQGQ 450
                                .|..| ::|::|     :.:|.....|.:....:||:||.|:.|:
 Frog   443 --------------------TGQNCDININDC-----LGQCQNGGTCRDLVNGFRCICPPGYAGE 482

  Fly   451 GYLHCE-NINECQDNPCGENAICTDTVGSFVCTCKPDYTGDPFRGCVDIDECTALDKPCGQHAVC 514
               .|| ::|||..|||.....|.|.:..|.|.|...::|:..:  :|||.|.  ..||...|.|
 Frog   483 ---RCEKDVNECVSNPCLNGGHCQDEINGFQCLCPAGFSGNLCQ--LDIDYCE--PDPCQNGAQC 540

  Fly   515 ENTVPGYNCKCPQGYDGKPDPKVACEQVDVNILCSSNFDCTNNAECIENQCFCLDGFEPIGSSCV 579
            .|....|.|.|.:.|:||                        |...:::.|..        :.|.
 Frog   541 FNLATDYFCNCSEDYEGK------------------------NCSHLKDHCRT--------TPCE 573

  Fly   580 DIDECRT--------------HAEVCGPHAQCLN-TPGSYGCECEAGYVGSPPRMACKQ---PCE 626
            .||.|..              .:.|||||.:|.: :.|.:.|||..|:.|:    .|.:   .||
 Frog   574 VIDSCTVAVASNSTPEGVRYISSNVCGPHGKCRSQSGGKFTCECNKGFTGT----YCHENINDCE 634

  Fly   627 DVRCGAHAYCKPDQNEAYCVCEDGWTYNPSDVAAGC-VDIDECDVMHGPFGSCGQNATCTNSAGG 690
            ...|.....|....|...|:|.|||.      ...| .:|::|..     ..|....||.:....
 Frog   635 SNPCKNGGTCIDGVNSYKCICSDGWE------GIYCETNINDCSK-----NPCYNGGTCRDLVND 688

  Fly   691 FTCACPPGFSGDP-HSKCVDVDE--CRTGASKC---GAGAECVNVPGG--GYTCRCPGNTIADPD 747
            |.|.|..|:.|.. ||:....||  |..|.: |   |...:|: .|.|  |.||....|:...|:
 Frog   689 FYCECKNGWKGKTCHSRDSQCDEATCNNGGT-CYDEGDTFKCI-CPAGWEGATCNIARNSSCLPN 751

  Fly   748 PSVRCVPIVSCSANEDCPGNSICDATKRCLCPEPNIG-------NDCR-HPCEALNCGAHAQCML 804
            |   |....:|....|         :..|:|.|...|       |||. |||  .|.|.   |:.
 Frog   752 P---CFNGGTCVVRGD---------SFTCVCKEGWEGPTCSQNTNDCSPHPC--YNSGT---CVD 799

  Fly   805 ANGQAQCLCAPGYTGNSALAGGCN-DIDECRANPCAEKAICSNTAGGYLCQCPGGSSGDPYREGC 868
            .:...:|.||||:.|..     |. :|:||:::|||..|.|.:...||.|.||.|.||...:|  
 Frog   800 GDNWYRCECAPGFAGPD-----CRININECQSSPCAFGATCIDEINGYRCTCPPGRSGPRCQE-- 857

  Fly   869 ITSKTVGCSDANPCATGETCVQDSYTGNSVCICRQGYERNSENGQCQDVDECSVQRGKPACGLNA 933
                          .||..|:.:.:.              ..:|...| |:|:            
 Frog   858 --------------VTGRPCITNGHM--------------MPDGAKWD-DDCN------------ 881

  Fly   934 LCKNLPGSYECRCPQGHNGNPFIMCEICNTPECQCQSPYKLVGNSCVLSGCSSGQACPSGAECIS 998
                     .|:|..|.        ..|:...|..|        .|.:.|.|.   ||:|..|:.
 Frog   882 ---------SCQCLNGK--------VTCSKVWCGPQ--------RCDIHGSSE---CPAGQTCVP 918

  Fly   999 IAGGVSYCACPKGYQTQPDGSCVDVDECEERGAQLCAFGAQCVNKPGSYSCHCPEGYQGDAYNGL 1063
            |..  ::|..|         .|..|.||....           ..|....|:....||       
 Frog   919 IRD--NHCFVP---------PCTGVGECWPTN-----------QPPVKTKCNANASYQ------- 954

  Fly  1064 CALAQRKCAADRECA-----ANEKCIQPG---ECVCPPPYFLDPQDNNKCKSPCERFPCGINAKC 1120
                      |..||     .|::.:.||   |.:|.     :.::.|..|:....:...|..:.
 Frog   955 ----------DASCANITFTFNKEMMSPGLTTESICN-----ELRNLNILKNVSAEYSIYITCEL 1004

  Fly  1121 TPS 1123
            :||
 Frog  1005 SPS 1007

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 3/28 (11%)
EGF_CA 212..247 CDD:238011 15/35 (43%)
EGF_CA 255..>286 CDD:214542 5/30 (17%)
EGF_CA 298..331 CDD:238011 11/32 (34%)
EGF_CA 338..373 CDD:238011 13/34 (38%)
EGF_CA 413..456 CDD:238011 10/42 (24%)
EGF_CA 457..490 CDD:238011 11/32 (34%)
EGF_CA 497..>529 CDD:214542 12/31 (39%)
EGF_CA 580..>612 CDD:214542 13/46 (28%)
EGF_3 676..702 CDD:289699 7/25 (28%)
EGF_CA 1022..1056 CDD:214542 5/33 (15%)
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
jag1XP_002931784.1 MNNL 32..107 CDD:369454
DSL 167..229 CDD:366627 20/87 (23%)
EGF_CA 296..334 CDD:238011 16/42 (38%)
EGF 340..370 CDD:333761 7/29 (24%)
EGF_CA 374..410 CDD:238011 12/38 (32%)
EGF_CA 412..447 CDD:238011 14/72 (19%)
EGF_CA 450..485 CDD:238011 10/42 (24%)
EGF_CA 487..523 CDD:238011 12/35 (34%)
EGF_CA 525..560 CDD:238011 15/60 (25%)
EGF_CA 629..665 CDD:238011 10/41 (24%)
EGF_CA 667..702 CDD:238011 10/39 (26%)
EGF 709..739 CDD:333761 10/31 (32%)
EGF 748..778 CDD:333761 9/41 (22%)
EGF_CA 782..817 CDD:238011 15/44 (34%)
EGF_CA 820..856 CDD:238011 16/35 (46%)
VWC_out 863..929 CDD:214565 21/131 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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