DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and snap91

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_012818222.1 Gene:snap91 / 100170497 XenbaseID:XB-GENE-1013213 Length:916 Species:Xenopus tropicalis


Alignment Length:765 Identity:160/765 - (20%)
Similarity:256/765 - (33%) Gaps:212/765 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  5436 IGSTGGQVTEQTTS------SPSEVRTTIRVEESTLPSRSADRTTPSESPETPTLPSDFTTRPHS 5494
            :|...|.:.:.|..      :||.:..|:....:||..:....:..|.||...:.|:...|.|::
 Frog   257 VGIDKGDIPDLTQDGCIDEPAPSSLLETLEQHLNTLEGKKPGSSEGSGSPVGKSSPATTVTSPNA 321

  Fly  5495 EQTTESTRDVPTTRPFEASTPSSASLETTVP-------------SVTLETTTNVPIGST--GGQV 5544
                ..::.|.|:.|.:....:||:.....|             |.|..:.:.:|.|::  |..:
 Frog   322 ----TPSKTVDTSPPIDLFATASAAAAICSPKLSNDLLDLQPDFSSTTVSASALPGGASAWGDLL 382

  Fly  5545 TEQTTSSPSEFRTTIRVEESTLPSRSADRTTPSESPETPTLPSDFTTRPHSEQTTESTRDVPTTR 5609
            .|.:.|:||         .||:.|            |.|.|...|:..|                
 Frog   383 GEDSLSAPS---------ASTVTS------------EAPQLSDPFSAEP---------------- 410

  Fly  5610 PFEASTPSPASLETTVPSVTSETTTNVPIGSTGGQVTGQT-TAPPSEVRTTIRVEESTLPSRSTD 5673
              .||..:|:  |||..|| |...||:|..|....:.|.. .|.|.|...|:  :.:..|     
 Frog   411 --SASIAAPS--ETTNSSV-SAAATNIPTSSAEVDLFGDAFAASPGEATATL--DGAAAP----- 463

  Fly  5674 RTTPSESPETPTI---------LPSDSTTRT------YSDQTTESTRDV--PTTRPFE---ASTP 5718
               |:.:|....:         .||:.:...      ::.:.||::..|  |||....   |:||
 Frog   464 ---PTPAPVAAALDACSGHDPFAPSEGSAEAAPELDLFALKPTETSAPVVTPTTSAASTVLATTP 525

  Fly  5719 SP--------ASLETTVPSVTLETTTNVPIGSTGGQVTGQTTATPS-EVRTTIGVEESTLPSRST 5774
            ||        |:...|..:.|..||......:|....|..|||.|: ::...:....|..|:   
 Frog   526 SPPPPPAAVAAAAAATTTTTTTTTTATTTAATTSASTTTTTTAPPALDIFGDLFDSVSETPA--- 587

  Fly  5775 DRTSPSESPETPTTLPSDFTTRPHSDQTTES---TRDVPTTRPFEASTPSPASLETTVPSVTSET 5836
             .|.|..:|.........|::.||.......   |.|:.:...|.|...:||:    .|:.|..:
 Frog   588 -ATKPDAAPSIDLFGTDAFSSPPHGASPVPEASLTGDLLSVDTFAAPAAAPAA----SPAKTESS 647

  Fly  5837 TTNVPIGSTGGQVTE------QTTSSPSEVRTTIGLEESTLPSRSTDRTSPSESPETPTTLPSDF 5895
            ......|...|.|.|      ..|||.:......|...|.:        :||.:|.||.   .:.
 Frog   648 AVLDLFGDAFGGVAEPQPAAMAPTSSSASADLLAGFGGSFM--------APSPTPITPA---QNN 701

  Fly  5896 ITRPHSDQTTESTRDVPTTRPFEAS-----------TPSPASLETT--VPSVTSETTTNVPIGS- 5946
            :.:|..|....:::...:...|:||           |.:|||..::  .||..:.......:|| 
 Frog   702 LIQPSFDAAFVTSQPAASASSFDASVFDGLGDLLIPTMTPASQPSSSLTPSAGNAGAAGKALGSD 766

  Fly  5947 --------TGGQVTGQTTAPPSEVRTTIGVEESTLPSRSTDRTSPSESPETPTTLPSDFITRPHS 6003
                    .|......||....:::...|.::.|    ......|..:|.|.:|           
 Frog   767 LDSSLASLVGNLGIAGTTVKKGDLQWNAGEKKLT----GGANWQPKVAPATWST----------- 816

  Fly  6004 EQTTESTRDVPTTRPFEASTPSPASLKTTVPSVTSEATTNVPIGSTGQRIGTTPSESPETPTTLP 6068
                    ..|::.|.:.||| |.|   .||...|.|.:..|:...|...||.....|:.|....
 Frog   817 --------GGPSSSPMQGSTP-PVS---GVPPAASAAPSTQPVAGFGLPSGTGVPMMPQQPMMYG 869

  Fly  6069 SDFTTRPHSEKTTESTRDVPTTRPF----------ETSTPSPASLETTVP 6108
            .                  |..||.          .:.:|||||.....|
 Frog   870 Q------------------PMIRPSFGGAAVPGAPLSPSPSPASQSPKKP 901

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699
EGF_CA 212..247 CDD:238011
EGF_CA 255..>286 CDD:214542
EGF_CA 298..331 CDD:238011
EGF_CA 338..373 CDD:238011
EGF_CA 413..456 CDD:238011
EGF_CA 457..490 CDD:238011
EGF_CA 497..>529 CDD:214542
EGF_CA 580..>612 CDD:214542
EGF_3 676..702 CDD:289699
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572 12/56 (21%)
DUF4758 5445..5650 CDD:292572 49/226 (22%)
DUF4758 5700..5877 CDD:292572 47/199 (24%)
DUF4696 5756..6396 CDD:292395 78/395 (20%)
DUF4758 5802..5979 CDD:292572 40/207 (19%)
DUF4758 5964..6171 CDD:292572 32/155 (21%)
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
snap91XP_012818222.1 ANTH 19..291 CDD:284961 6/33 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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