DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpy and sned1

DIOPT Version :9

Sequence 1:NP_001260032.1 Gene:dpy / 318824 FlyBaseID:FBgn0053196 Length:22949 Species:Drosophila melanogaster
Sequence 2:XP_017212114.1 Gene:sned1 / 100001751 ZFINID:ZDB-GENE-100913-1 Length:1374 Species:Danio rerio


Alignment Length:933 Identity:225/933 - (24%)
Similarity:321/933 - (34%) Gaps:341/933 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 GCQVNESTEYLQLFNLSKLCDGTQDCFLGADELSKELKCTNDCDKDGTKCTHGACLNGVCHCNDG 119
            ||  |:|         :.:|...:.|..|.       :|.:||.......|        |.|..|
Zfish   263 GC--NDS---------ASVCANLRPCRNGG-------RCIDDCITGNPSFT--------CSCLAG 301

  Fly   120 YGGCNC-VDKDENECKQRPCDVFAHCTNTLGSFTCTCFPGYRGNGFHCE-DIDECQDPAIAARCV 182
            :.|..| ::.|  ||...||.....|.:.:..|.|.|..|:  .|..|| ||||||:    ..|:
Zfish   302 FTGRRCQIEVD--ECSSYPCQNGGTCVDKINHFICLCPVGF--IGATCETDIDECQE----TPCL 358

  Fly   183 ENAECCNLPAHFLCKCKDGYEGDGEVLC-TDVDECRNPENCGPNALCTNTPGNYTCSCPDGYVGN 246
            ..|:|.....:|.|||:.||.|   .|| :|::||.:.. |....:|.:...||||:|...:.|:
Zfish   359 NGAQCIQGVGNFTCKCQAGYTG---FLCESDINECMSVP-CLNGGVCEDLVNNYTCTCTANFTGS 419

  Fly   247 NPYREGCQ---------DVDECSYPNVCGPGAIC--TNLEGSYRCDCPPGYDGDGRSESGCVDQD 300
                 .|:         :..|.....:|....||  || .|:|.|.|.|||.||     .|  ::
Zfish   420 -----ACETELVVADAANQTESCVGEICNKHQICEYTN-SGNYSCTCMPGYYGD-----NC--EE 471

  Fly   301 ECARTPCGRNADCLNTDGSFRCLCPDGYSGDPMNGCE-DVDE--CATNNPCGLGAECVNLGGSFQ 362
            ||   ||.....|::.:|:  |.||.|::|   ..|: :|.:  |:.|.||..|..|:..||::.
Zfish   472 EC---PCQNGGICVDVNGT--CDCPTGFTG---LYCQFEVTQTPCSNNRPCPDGGPCLEYGGTYL 528

  Fly   363 CRCPSGFVLEHDPHADQLPQPLNTQQLGYGPGATDIAPYQRTSGAGLACLDIDECNQPDGVAKCG 427
            |.|.:|...:|                      .|..||.:...|         |:.    :.|.
Zfish   529 CTCQTGAEFDH----------------------KDFYPYVQPQSA---------CDS----SPCQ 558

  Fly   428 TNAKCINFPGSYRCLCPSGFQGQGYLHCENI--NECQDNPCGENAICTDTVGSFVCTCKPDYTGD 490
            ....|....|.|.|.|..|::|:   |||.:  :.|..:||.....|.:...|:.|.|...:|  
Zfish   559 NGGYCYERDGDYICECKHGYRGK---HCERVRLSICASSPCRNGGSCKEEADSYHCVCPYRFT-- 618

  Fly   491 PFRGCVDIDECTALDKPCGQHAVCENTVPGYNCKCPQGYDGKPDPKVACEQVDVNILCSSNFDCT 555
                              |:|  ||              .|||||            |:|: .|.
Zfish   619 ------------------GKH--CE--------------VGKPDP------------CASS-PCR 636

  Fly   556 NNAECIENQCFCLDGFEPIGSSCVDIDECRTHAEVCGPHAQCLNTPGSYGCECEAGYVGSPPRMA 620
            |...|          |..|                           |.|.|||...::|.     
Zfish   637 NGGTC----------FHYI---------------------------GKYKCECSPSFMGR----- 659

  Fly   621 CKQPCEDVRCGAHAYCKPDQNEAYCVCEDGWTYNPSDVAAGCVDIDECDVMHGPFGSCGQNATCT 685
                                                          .|::..|           :
Zfish   660 ----------------------------------------------HCEINRG-----------S 667

  Fly   686 NSA-GGFTCACPPGFSGDPHSKCVDVDECRTGASKCGAGAECVNVPGGG--YTCRCPGNTIADPD 747
            |.| .|..|. ||     ..:|..:|....|             .||..  |.|. ||.|     
Zfish   668 NPALEGLDCG-PP-----VKAKHAEVQYSST-------------TPGSMALYLCH-PGYT----- 707

  Fly   748 PSVRCVPIVSCSANEDCPGNSICDATKRCLCPEPNIGNDCRHPCEALNCGAHAQCMLANGQAQCL 812
            |..|...|: ||:........:|:....||          ..||  :|.|.   |........|.
Zfish   708 PLTRATQII-CSSQGSWSQPPVCEEINECL----------SQPC--MNGGT---CRDRVASYLCE 756

  Fly   813 CAPGYTGNSALAGGC-NDIDECRANPCAEKAICSNTAGGYLCQCPGGSSG---DPYREGCITSKT 873
            |..|:||..     | .|:|||.:.||...:.|.:..|.|.|.|..|.:|   :..::||     
Zfish   757 CEEGFTGQR-----CQTDMDECLSEPCKHGSTCEDQPGSYFCHCQEGYAGQDCEMEQDGC----- 811

  Fly   874 VGCSDANPCATGETCVQDSYTGNSVCICRQGYERNSENGQCQDVDE-CSVQRGKPACGLNALCK- 936
                :.|||..|..|  ..|..|.:|:|::||    ...:||.::. |.:|    .||...:|: 
Zfish   812 ----EPNPCLNGGIC--RGYRRNHLCVCKEGY----IGDRCQTLENPCVLQ----PCGNRGVCRS 862

  Fly   937 NLPGSYECRCPQGHNGNPFIMCE 959
            :..|:|.|.|..||.|..   ||
Zfish   863 DRRGNYSCACRVGHTGRD---CE 882

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpyNP_001260032.1 EGF_3 137..166 CDD:289699 8/28 (29%)
EGF_CA 212..247 CDD:238011 11/34 (32%)
EGF_CA 255..>286 CDD:214542 11/32 (34%)
EGF_CA 298..331 CDD:238011 10/32 (31%)
EGF_CA 338..373 CDD:238011 12/36 (33%)
EGF_CA 413..456 CDD:238011 10/42 (24%)
EGF_CA 457..490 CDD:238011 8/34 (24%)
EGF_CA 497..>529 CDD:214542 4/31 (13%)
EGF_CA 580..>612 CDD:214542 5/31 (16%)
EGF_3 676..702 CDD:289699 6/26 (23%)
EGF_CA 1022..1056 CDD:214542
EGF_CA 2227..2260 CDD:238011
EGF_CA 2393..>2422 CDD:214542
DUF4758 4088..4282 CDD:292572
DUF4696 4127..4678 CDD:292395
DUF4758 4275..4448 CDD:292572
DUF4758 4377..4574 CDD:292572
DUF4758 4581..4754 CDD:292572
DUF4758 4683..4847 CDD:292572
DUF4758 4785..4964 CDD:292572
DUF4696 4841..5385 CDD:292395
DUF4758 4887..5098 CDD:292572
DUF4758 5193..5371 CDD:292572
DUF4758 5294..5487 CDD:292572
DUF4758 5445..5650 CDD:292572
DUF4758 5700..5877 CDD:292572
DUF4696 5756..6396 CDD:292395
DUF4758 5802..5979 CDD:292572
DUF4758 5964..6171 CDD:292572
DUF4758 6181..6360 CDD:292572
DUF4696 6339..6999 CDD:292395
DUF4758 6662..6839 CDD:292572
DUF4758 6764..6941 CDD:292572
DUF4758 6866..7045 CDD:292572
DUF4758 6968..7179 CDD:292572
DUF4696 7024..7569 CDD:292395
DUF4758 7172..7383 CDD:292572
DUF4696 7330..7964 CDD:292395
DUF4758 7400..7587 CDD:292572
DUF4758 7538..7707 CDD:292572
DUF4758 7798..7979 CDD:292572
DUF4758 7946..8126 CDD:292572
YppG 18767..>18832 CDD:290883
Med25_SD1 18795..18955 CDD:288132
MISS 19026..19258 CDD:292450
ZP 22576..22811 CDD:214579
Zona_pellucida <22714..22810 CDD:278526
sned1XP_017212114.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.