DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cfp1 and Cxxc1

DIOPT Version :9

Sequence 1:NP_572556.1 Gene:Cfp1 / 31880 FlyBaseID:FBgn0030121 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_001365773.1 Gene:Cxxc1 / 74322 MGIID:1921572 Length:664 Species:Mus musculus


Alignment Length:637 Identity:228/637 - (35%)
Similarity:319/637 - (50%) Gaps:148/637 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 YCICRSSDCSRFMIGCDGCEEWYHGDCIGITEKEAKHIKQYYCRRCKKENPELQTIFR-LVATER 125
            |||||..|.:.||||||.|.||:|||||.||||.||.|:::|||.|::::|:|:..:| ....||
Mouse    28 YCICRKPDINCFMIGCDNCNEWFHGDCIRITEKMAKAIREWYCRECREKDPKLEIRYRHKKCRER 92

  Fly   126 AAASNAASTSLNAPG--------------VGPSGAAPAAAPVASATTSQQAPPPTTAAAKRKNSS 176
            ..:..|.|...:..|              .|......|.....||:..:.:|.|..|...:.:..
Mouse    93 DGSERAGSEPRDEGGGRKRPASDPELQRRAGSGTGVGAMLARGSASPHKSSPQPLVATPSQHHHQ 157

  Fly   177 ARE------PKMGKRCGTCEGCRR-PNCNQCDACR--VRVGH----KPRCIFRTCVVQAATVLK- 227
            .::      .:..:.||.||.||| .:|..||.||  .:.|.    :.:|..|.|.::|....| 
Mouse   158 QQQQQQQQIKRSARMCGECEACRRTEDCGHCDFCRDMKKFGGPNKIRQKCRLRQCQLRARESYKY 222

  Fly   228 ---------ESQA---------TQAGPSR-------KREKAAPKSRNVQVGPRA-ASPE------ 260
                     .|:|         ||..|.:       :.::....|..|:..|.| |:||      
Mouse   223 FPSSLSPVTPSEALPRPRRPPPTQQQPQQSQKLGRIREDEGTVLSSVVKEPPEATATPEPLSDED 287

  Fly   261 ------------------------------IFLNPELQ--------------------------- 268
                                          .||:|.|:                           
Mouse   288 LALDPDLYQDFCAGAFDDHGLPWMSDAEESPFLDPALRKRAVKVKHVKRREKKSEKKVMERKEER 352

  Fly   269 --------------------------GIRQCYGPNCCSHARPQSKYCSDKCGFNLATKRIFQVLP 307
                                      .:.||.||.|...|:|.||||||.||..||..||:::||
Mouse   353 YKRHRQKQKHKDKWKHPERADAKDPASLPQCLGPGCVRAAQPGSKYCSDDCGMKLAANRIYEILP 417

  Fly   308 QRLQEWNLTPSRAAEETRKHLDNIRHKQSLVRFALAELEKRSEELNMVVERAKRSSI--DTLGSQ 370
            ||:|:|..:|..|.|..:|.|:.||.:|...|..|.|:|:|..||..::.|||:.::  |...::
Mouse   418 QRIQQWQQSPCIAEEHGKKLLERIRREQQSARTRLQEMERRFHELEAIILRAKQQAVREDEENNE 482

  Fly   371 DTADMEDEQSMYCITCGHEIHSRTAIKHMEKCFNKYESQASFGSIFKTRMEG-NNMFCDFYNPAS 434
            :.:|..|.| ::|::|||.|:.|.|::|||:|:.|||||.||||::.||:|| ..:|||.|||.|
Mouse   483 NDSDDTDLQ-IFCVSCGHPINPRVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQS 546

  Fly   435 KTYCKRLRVLCPEHSKDPKVNDTDVCGSPLVNNVFNPTGEFCRAPKKNCFKHYAWEKIRRAEIDL 499
            |||||||:|||||||:||||...:|||.|||.:||..||:|||.||:.|.:||.|||:||||:||
Mouse   547 KTYCKRLQVLCPEHSRDPKVPADEVCGCPLVRDVFELTGDFCRLPKRQCNRHYCWEKLRRAEVDL 611

  Fly   500 ERVRQWLKMDDLMEQERVMRQQLTSRANLLGLMLHSTYNHEVMDELVRKQQE 551
            ||||.|.|:|:|.||||.:|..:|:||.||.||||.|..|:.:...:|...:
Mouse   612 ERVRVWYKLDELFEQERNVRTAMTNRAGLLALMLHQTIQHDPLTTDLRSSAD 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cfp1NP_572556.1 PHD_Cfp1 62..107 CDD:277028 30/44 (68%)
zf-CXXC 178..218 CDD:251032 15/52 (29%)
zf-CpG_bind_C 300..532 CDD:289071 124/234 (53%)
Cxxc1NP_001365773.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
PHD_Cfp1 28..73 CDD:277028 30/44 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..166 12/74 (16%)
zf-CXXC 166..212 CDD:366873 15/45 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 223..287 12/63 (19%)
zf-CpG_bind_C 410..644 CDD:403474 124/234 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 272 1.000 Domainoid score I1805
eggNOG 1 0.900 - - E1_KOG1632
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32221
Inparanoid 1 1.050 430 1.000 Inparanoid score I1718
Isobase 1 0.950 - 0 Normalized mean entropy S4178
OMA 1 1.010 - - QHG48041
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003492
OrthoInspector 1 1.000 - - otm43462
orthoMCL 1 0.900 - - OOG6_107072
Panther 1 1.100 - - LDO PTHR46174
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1383
SonicParanoid 1 1.000 - - X3950
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.810

Return to query results.
Submit another query.