DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cfp1 and cxxc1

DIOPT Version :9

Sequence 1:NP_572556.1 Gene:Cfp1 / 31880 FlyBaseID:FBgn0030121 Length:663 Species:Drosophila melanogaster
Sequence 2:XP_031747257.1 Gene:cxxc1 / 613066 XenbaseID:XB-GENE-5910691 Length:609 Species:Xenopus tropicalis


Alignment Length:617 Identity:214/617 - (34%)
Similarity:301/617 - (48%) Gaps:160/617 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 YCICRSSDCSRFMIGCDGCEEWYHGDCIGITEKEAKHIKQYYCRRCKKENPELQTIFRLV----- 121
            |||||..|.:.||||||.|.||:||.||.||||.||.|:::||.:|:.::|.|:..:|..     
 Frog    25 YCICRKPDINCFMIGCDNCNEWFHGHCINITEKMAKAIREWYCVQCRDKHPHLEIKYRHKKSKER 89

  Fly   122 --ATERAAASNAASTSLNAPGVGPSGAAPAAAPVASATTSQQAPPPTTAAAKRKNSSAREPKMGK 184
              .||:......|.......|             :::::|.:.|         :....|..:|  
 Frog    90 ERETEKDENEETAKNEKKKSG-------------STSSSSNKVP---------RQQIKRSARM-- 130

  Fly   185 RCGTCEGC-RRPNCNQCDACR--VRVGH----KPRCIFRTCVVQAA------------------- 223
             ||.||.| |..:|.|||.||  .:.|.    :.:|..|.|.|:|.                   
 Frog   131 -CGECEACSRTEDCGQCDFCRDMKKFGGPNKIRQKCRLRQCQVRARVSRRAPVSPGAEWPLLSAP 194

  Fly   224 ----------------------------------------------------------------- 223
                                                                             
 Frog   195 VVPGYSILLLQKMLRVKDDDLSLFRDTPEPSSLAGSLSDDDLPLDPELYQELCAGGAFDDHNLPW 259

  Fly   224 -----------TVLKESQATQAGPSRKREKAA------------PKSRNVQVGPRAASPEIFLNP 265
                       :|::: :|.:....::|||.|            .|.|:......:...||   .
 Frog   260 LSDTDDTPFLDSVMRK-RAVKVKHVKRREKKADKKKDEKYKRHKQKQRHKDKTKHSERTEI---R 320

  Fly   266 ELQGIRQCYGPNCCSHARPQSKYCSDKCGFNLATKRIFQVLPQRLQEWNLTPSRAAEETRKHLDN 330
            :...:|||.||:|...||..||||||.||..||..||:::||||:|:|..:|..|.|:.:|.|:.
 Frog   321 DFSSLRQCLGPSCVQPARSSSKYCSDDCGMKLAANRIYEILPQRIQQWQQSPCVAEEQGKKLLER 385

  Fly   331 IRHKQSLVRFALAELEKRSEELNMVVERAKRSSI-----DTLGSQDTADMEDEQSMYCITCGHEI 390
            ||.:|...|..|..:|.|..||..::.:||:..|     ...|..|..|::    ::|::|||.|
 Frog   386 IRREQQQARTKLQNMESRFHELEALISKAKQQQIREDEETNEGDSDDTDLQ----IFCVSCGHPI 446

  Fly   391 HSRTAIKHMEKCFNKYESQASFGSIFKTRMEG-NNMFCDFYNPASKTYCKRLRVLCPEHSKDPKV 454
            :.:.|::|||:|:.|||||.||||::.||:|| ..:|||.|||.||||||||:|||||||:||||
 Frog   447 NPKVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPHSKTYCKRLQVLCPEHSRDPKV 511

  Fly   455 NDTDVCGSPLVNNVFNPTGEFCRAPKKNCFKHYAWEKIRRAEIDLERVRQWLKMDDLMEQERVMR 519
            ...:|||.|:|.:||..||:|||.||:.|.:||.|||:||||:||||||.|.|:|:|.||||.:|
 Frog   512 PADEVCGCPMVKDVFELTGDFCRVPKRKCNRHYCWEKLRRAEVDLERVRLWYKLDELFEQERNVR 576

  Fly   520 QQLTSRANLLGLMLHSTYNHEVMDELVRKQQE 551
            ..:|:||.||.||||.|..|:.:...:|...|
 Frog   577 MAMTNRAGLLALMLHQTIQHDPVTTDLRTHTE 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cfp1NP_572556.1 PHD_Cfp1 62..107 CDD:277028 28/44 (64%)
zf-CXXC 178..218 CDD:251032 17/46 (37%)
zf-CpG_bind_C 300..532 CDD:289071 120/237 (51%)
cxxc1XP_031747257.1 PHD_Cfp1 25..70 CDD:277028 28/44 (64%)
zf-CXXC 123..170 CDD:366873 17/49 (35%)
zf-CpG_bind_C 355..589 CDD:403474 120/237 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 268 1.000 Domainoid score I1835
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H32221
Inparanoid 1 1.050 320 1.000 Inparanoid score I2482
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351589at33208
OrthoFinder 1 1.000 - - FOG0003492
OrthoInspector 1 1.000 - - otm48617
Panther 1 1.100 - - LDO PTHR46174
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1383
SonicParanoid 1 1.000 - - X3950
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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