DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cfp1 and cxxc1a

DIOPT Version :10

Sequence 1:NP_572556.1 Gene:Cfp1 / 31880 FlyBaseID:FBgn0030121 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_956893.1 Gene:cxxc1a / 393571 ZFINID:ZDB-GENE-040426-1142 Length:570 Species:Danio rerio


Alignment Length:589 Identity:211/589 - (35%)
Similarity:306/589 - (51%) Gaps:115/589 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 PERKSKIATILKQEDQAYCICRSSDCSRFMIGCDGCEEWYHGDCIGITEKEAKHIKQYYCRRCKK 109
            |||     |:::.....||:||..|.:.||||||.|.||:|||||.|:||.||.|:.:||.:|:.
Zfish    14 PER-----TLIRGNAPVYCVCRRPDINCFMIGCDSCSEWFHGDCIKISEKTAKTIRVWYCEKCRS 73

  Fly   110 ENPELQTIFR-LVATERAAASNAASTSLNAPGVGPSGAAPAAAPVASATTSQQAPPPTTAAAKRK 173
            ::..|:..:| ..:.|:.|.::...|..:.|.....|                          |:
Zfish    74 KDETLEVKYRPKKSREKEAETDGPDTQPDTPDFKSDG--------------------------RR 112

  Fly   174 NSSAREPKMGKRCGTCEGC-RRPNCNQCDACR--VRVGH----KPRCIFRTCVVQAATVLK---- 227
            .|  |..:..:.||.||.| |..:|..||.|:  .:.|.    :.:|..|.|.|:|..:|:    
Zfish   113 GS--RIKRSARMCGECEACLRTEDCGLCDFCKDMKKFGGPNKIRQKCRLRQCEVRARKMLRVKEE 175

  Fly   228 -----ESQATQAGP--------------------------------------------------- 236
                 :|:..|.||                                                   
Zfish   176 EYSMSKSRDYQDGPLSEEYSENELELYQQYCAGQYGDNGTGWNSDDDDGSYGESSLRKKAVKVKH 240

  Fly   237 -------SRKREKAAPKSRNVQVGPRAASPEIFLNPELQ------GIRQCYGPNCCSHARPQSKY 288
                   |.|.||...::::.:..|:....:...:.|..      |.|||.||.|...||..|||
Zfish   241 VKRREKRSEKSEKKKEENKSRKHKPKQKHRDRVRHSERAEVRDSGGARQCLGPGCVEAARANSKY 305

  Fly   289 CSDKCGFNLATKRIFQVLPQRLQEWNLTPSRAAEETRKHLDNIRHKQSLVRFALAELEKRSEELN 353
            |||.||..||..||.::||||:|:|..:|..|.|:.:|.|:.||.:|.|.|..|.|:|||..||.
Zfish   306 CSDDCGMKLAANRICEILPQRIQQWQQSPCIAEEQGKKFLERIRREQQLARMRLTEMEKRFHELE 370

  Fly   354 MVVERAKRSSIDTLGSQDTADMEDEQSMYCITCGHEIHSRTAIKHMEKCFNKYESQASFGSIFKT 418
            .::.:||:..:......:..|.:.:..::|::|.|.::.:.|::|||:|:.|||||.||||::.|
Zfish   371 GIIAKAKQQVVQYDEEVNEGDDDTDLQIFCVSCSHSVNPKVALRHMERCYAKYESQTSFGSMYPT 435

  Fly   419 RMEG-NNMFCDFYNPASKTYCKRLRVLCPEHSKDPKVNDTDVCGSPLVNNVFNPTGEFCRAPKKN 482
            |:|| ..:|||.|||.||||||||:|||||||:|||:...:|||.|||.:||.||||:||..|:.
Zfish   436 RIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKIPADEVCGCPLVRDVFEPTGEYCRVSKRK 500

  Fly   483 CFKHYAWEKIRRAEIDLERVRQWLKMDDLMEQERVMRQQLTSRANLLGLMLHSTYNHEVMDELVR 547
            |.|||.|||:||||:||||||.|.|:|:|.||||.::..:|:||.|:.||.|.|..|:.:...:|
Zfish   501 CNKHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVKTAMTNRAGLMALMPHQTIQHDPITTDLR 565

  Fly   548 KQQE 551
            ..::
Zfish   566 TSKD 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cfp1NP_572556.1 PHD_Cfp1 62..107 CDD:277028 27/44 (61%)
zf-CXXC 178..218 CDD:366873 14/46 (30%)
CpG_bind_C 298..532 CDD:463514 118/234 (50%)
cxxc1aNP_956893.1 PHD_SF 26..71 CDD:473978 27/44 (61%)
zf-CXXC 115..162 CDD:366873 14/46 (30%)
CpG_bind_C 315..550 CDD:463514 118/234 (50%)

Return to query results.
Submit another query.