DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cfp1 and cxxc1a

DIOPT Version :9

Sequence 1:NP_572556.1 Gene:Cfp1 / 31880 FlyBaseID:FBgn0030121 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_956893.1 Gene:cxxc1a / 393571 ZFINID:ZDB-GENE-040426-1142 Length:570 Species:Danio rerio


Alignment Length:589 Identity:211/589 - (35%)
Similarity:306/589 - (51%) Gaps:115/589 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 PERKSKIATILKQEDQAYCICRSSDCSRFMIGCDGCEEWYHGDCIGITEKEAKHIKQYYCRRCKK 109
            |||     |:::.....||:||..|.:.||||||.|.||:|||||.|:||.||.|:.:||.:|:.
Zfish    14 PER-----TLIRGNAPVYCVCRRPDINCFMIGCDSCSEWFHGDCIKISEKTAKTIRVWYCEKCRS 73

  Fly   110 ENPELQTIFR-LVATERAAASNAASTSLNAPGVGPSGAAPAAAPVASATTSQQAPPPTTAAAKRK 173
            ::..|:..:| ..:.|:.|.::...|..:.|.....|                          |:
Zfish    74 KDETLEVKYRPKKSREKEAETDGPDTQPDTPDFKSDG--------------------------RR 112

  Fly   174 NSSAREPKMGKRCGTCEGC-RRPNCNQCDACR--VRVGH----KPRCIFRTCVVQAATVLK---- 227
            .|  |..:..:.||.||.| |..:|..||.|:  .:.|.    :.:|..|.|.|:|..:|:    
Zfish   113 GS--RIKRSARMCGECEACLRTEDCGLCDFCKDMKKFGGPNKIRQKCRLRQCEVRARKMLRVKEE 175

  Fly   228 -----ESQATQAGP--------------------------------------------------- 236
                 :|:..|.||                                                   
Zfish   176 EYSMSKSRDYQDGPLSEEYSENELELYQQYCAGQYGDNGTGWNSDDDDGSYGESSLRKKAVKVKH 240

  Fly   237 -------SRKREKAAPKSRNVQVGPRAASPEIFLNPELQ------GIRQCYGPNCCSHARPQSKY 288
                   |.|.||...::::.:..|:....:...:.|..      |.|||.||.|...||..|||
Zfish   241 VKRREKRSEKSEKKKEENKSRKHKPKQKHRDRVRHSERAEVRDSGGARQCLGPGCVEAARANSKY 305

  Fly   289 CSDKCGFNLATKRIFQVLPQRLQEWNLTPSRAAEETRKHLDNIRHKQSLVRFALAELEKRSEELN 353
            |||.||..||..||.::||||:|:|..:|..|.|:.:|.|:.||.:|.|.|..|.|:|||..||.
Zfish   306 CSDDCGMKLAANRICEILPQRIQQWQQSPCIAEEQGKKFLERIRREQQLARMRLTEMEKRFHELE 370

  Fly   354 MVVERAKRSSIDTLGSQDTADMEDEQSMYCITCGHEIHSRTAIKHMEKCFNKYESQASFGSIFKT 418
            .::.:||:..:......:..|.:.:..::|::|.|.::.:.|::|||:|:.|||||.||||::.|
Zfish   371 GIIAKAKQQVVQYDEEVNEGDDDTDLQIFCVSCSHSVNPKVALRHMERCYAKYESQTSFGSMYPT 435

  Fly   419 RMEG-NNMFCDFYNPASKTYCKRLRVLCPEHSKDPKVNDTDVCGSPLVNNVFNPTGEFCRAPKKN 482
            |:|| ..:|||.|||.||||||||:|||||||:|||:...:|||.|||.:||.||||:||..|:.
Zfish   436 RIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKIPADEVCGCPLVRDVFEPTGEYCRVSKRK 500

  Fly   483 CFKHYAWEKIRRAEIDLERVRQWLKMDDLMEQERVMRQQLTSRANLLGLMLHSTYNHEVMDELVR 547
            |.|||.|||:||||:||||||.|.|:|:|.||||.::..:|:||.|:.||.|.|..|:.:...:|
Zfish   501 CNKHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVKTAMTNRAGLMALMPHQTIQHDPITTDLR 565

  Fly   548 KQQE 551
            ..::
Zfish   566 TSKD 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cfp1NP_572556.1 PHD_Cfp1 62..107 CDD:277028 27/44 (61%)
zf-CXXC 178..218 CDD:251032 14/46 (30%)
zf-CpG_bind_C 300..532 CDD:289071 117/232 (50%)
cxxc1aNP_956893.1 PHD_SF 26..71 CDD:304600 27/44 (61%)
zf-CXXC 115..162 CDD:251032 14/46 (30%)
zf-CpG_bind_C 317..550 CDD:289071 117/232 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 279 1.000 Domainoid score I1661
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32221
Inparanoid 1 1.050 431 1.000 Inparanoid score I1690
OMA 1 1.010 - - QHG48041
OrthoDB 1 1.010 - - D351589at33208
OrthoFinder 1 1.000 - - FOG0003492
OrthoInspector 1 1.000 - - mtm6560
orthoMCL 1 0.900 - - OOG6_107072
Panther 1 1.100 - - LDO PTHR46174
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3950
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.980

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