DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cfp1 and CG3347

DIOPT Version :9

Sequence 1:NP_572556.1 Gene:Cfp1 / 31880 FlyBaseID:FBgn0030121 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_001285579.1 Gene:CG3347 / 33538 FlyBaseID:FBgn0031513 Length:538 Species:Drosophila melanogaster


Alignment Length:554 Identity:122/554 - (22%)
Similarity:195/554 - (35%) Gaps:121/554 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 TILKQEDQAYCICRSSDCSRFMIGCDGCEEWYHGDCIGITEKEAKHIKQYYCRRCKKENPELQTI 117
            |.:..:| .|||||.|..:.|||.||.|.||:||||||:.....:....|||..|.::||.|:..
  Fly    15 TAVSSKD-VYCICRQSHINGFMICCDNCNEWFHGDCIGLPANIGEQHDTYYCTECFRKNPLLKCT 78

  Fly   118 FR-------LVATERAAASNAASTSLNAPGVGPSGAAPAAAPVASATTSQQAPPPTTAAAKRK-- 173
            ::       :..|.:...:.....:...|....:...|..|.:.::...:|.|...:...:.:  
  Fly    79 YKKSPSTTGVPKTPKTPKTPKTPKNPKTPKTPKNSKTPKTARIINSIGVRQNPRRRSTFVQERPS 143

  Fly   174 ---NSSAREPKMGKRCGTCEGCRRPNCNQCDACRVRVGHKPRCIFR----------TCVVQAATV 225
               |.|.:..|:.|..........|.   .||  .:|..||:...:          |...|...|
  Fly   144 EVPNPSRQSTKLQKAVNYENATEEPT---EDA--EKVDQKPKKTAKKKNPKPEDKVTDDAQKPAV 203

  Fly   226 LK--ESQATQAGPSRKREKAAPKSRNVQVGPRAASPEIFLNPELQGIRQCYGPNCCSHARPQSKY 288
            .|  ||:.||....|...|..|             ||   |.:.:|  .|:...|...||..|:|
  Fly   204 EKLFESKGTQCNMFRDWSKYVP-------------PE---NSKKRG--TCFTVFCQQLARSCSRY 250

  Fly   289 CSDKCGFNLATKRIFQ--VLP----------------------QRLQEWNLTPSRAAEETRKHLD 329
            |.|:||...|...:|.  :||                      .:....|...|.:..||:..:.
  Fly   251 CCDECGNFTAITNVFALGLLPNMPAMKVAMGHVGLLLGNDLTNNQKSNKNSEASESKTETKPKVK 315

  Fly   330 NIRH--KQSLVRFALAELEKRSEELNMVVERAK-RSSIDTLGSQDTADMEDEQSMYCITCGHEIH 391
            ..:.  ::|..|...:.||:..:......:|.| :..:.:..|:.:..:.:|....  |..|:..
  Fly   316 KPKSEGRKSRYRSPSSSLERSPDVSRTAAKRPKLQEELPSSSSRSSRKLVEESRSE--TERHKAK 378

  Fly   392 SRTAIKHMEKCFNKYE-----SQASFGSIFKTRMEGNN-------MFCDFYNPASKTYCKRLRVL 444
            .:|:.|........|.     |..|:.:...|.....|       .|...:..:|.|..||   :
  Fly   379 HKTSKKEKTSSQRAYSLSPIPSPKSYRAARNTSETAPNSPVNLKKTFKQKHVISSPTGKKR---V 440

  Fly   445 C-----------PEHSKDPKVNDTDVCGSPLVNNVFNPTGE-FCRAPKKNCFKHYAWEKIR--RA 495
            |           |...|..:|:.....|:...|.  .|..| .|:..:|..|.....|||:  |.
  Fly   441 CRSQTISADDPLPSQPKSTEVSPMASAGTSSSNK--KPVPETSCQKYRKLSFTDENCEKIKIIRC 503

  Fly   496 EID---------LERVRQWLKMDDLMEQERVMRQ 520
            .:.         |.|.|..:|    :..|:.:||
  Fly   504 IVSNMSPTEKALLARKRMMMK----LASEQHIRQ 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cfp1NP_572556.1 PHD_Cfp1 62..107 CDD:277028 23/44 (52%)
zf-CXXC 178..218 CDD:251032 8/49 (16%)
zf-CpG_bind_C 300..532 CDD:289071 51/283 (18%)
CG3347NP_001285579.1 PHD_SF 23..68 CDD:304600 23/44 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I2586
eggNOG 1 0.900 - - E1_KOG1632
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4178
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D463371at2759
OrthoFinder 1 1.000 - - FOG0003492
OrthoInspector 1 1.000 - - otm47268
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR46174
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1383
SonicParanoid 00.000 Not matched by this tool.
87.990

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