DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cfp1 and CG17440

DIOPT Version :9

Sequence 1:NP_572556.1 Gene:Cfp1 / 31880 FlyBaseID:FBgn0030121 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_572555.1 Gene:CG17440 / 31879 FlyBaseID:FBgn0030120 Length:366 Species:Drosophila melanogaster


Alignment Length:637 Identity:305/637 - (47%)
Similarity:328/637 - (51%) Gaps:281/637 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 TKEVSKQKEEIRREIAREFDLPERKSKIATILKQEDQAYCICRSSDCSRFMIGCDGCEEWYHGDC 88
            |....|.:||||||||||||||||||||||||||:|:.|||||||||||||||||||||||||||
  Fly     2 TDNDKKTEEEIRREIAREFDLPERKSKIATILKQKDREYCICRSSDCSRFMIGCDGCEEWYHGDC 66

  Fly    89 IGITEKEAKHIKQYYCRRCKKENPELQTIFRLVATERAAASNAASTSLNAPGVGPSGAAPAAAPV 153
            |.||||:|:|||.||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly    67 IEITEKDAEHIKNYYCRRCKKENPELQTIFRLVATERAAASNAASTSLNAPGVGPSGAAPAAAPV 131

  Fly   154 ASATTSQQAPPPTTAAAKRKNSSAREPKMGKRCGTCEGCRRPNCNQCDACRVRVGHKPRCIFRTC 218
            |.||||||||||||||||||||||:||                                      
  Fly   132 APATTSQQAPPPTTAAAKRKNSSAQEP-------------------------------------- 158

  Fly   219 VVQAATVLKESQATQAGPSRKREKAAPKSRNVQVGPRAASPEIFLNPELQGIRQCYGPNCCSHAR 283
                    ||||.||||  .||:|||||:.||||.|||.|||||||||||||:||:|||||||||
  Fly   159 --------KESQPTQAG--TKRDKAAPKTSNVQVSPRAVSPEIFLNPELQGIQQCHGPNCCSHAR 213

  Fly   284 PQSKYCSDKCGFNLATKRIFQVLPQRLQEWNLTPSRAAEETRKHLDNIRHKQSLVRFALAELEKR 348
            ||||||||:||.|||.:|:||:|||::||||:|||||||||||||                    
  Fly   214 PQSKYCSDECGSNLAIERLFQILPQQMQEWNITPSRAAEETRKHL-------------------- 258

  Fly   349 SEELNMVVERAKRSSIDTLGSQDTADMEDEQSMYCITCGHEIHSRTAIKHMEKCFNKYESQASFG 413
              |||                                                            
  Fly   259 --ELN------------------------------------------------------------ 261

  Fly   414 SIFKTRMEGNNMFCDFYNPASKTYCKRLRVLCPEHSKDPKVNDTDVCGSPLVNNVFNPTGEFCRA 478
                                                                             
  Fly   262 ----------------------------------------------------------------- 261

  Fly   479 PKKNCFKHYAWEKIRRAEIDLERVRQWLKMDDLMEQERVMRQQLTSRANLLGLMLHSTYNHEVMD 543
                                                                           ||
  Fly   262 ---------------------------------------------------------------MD 263

  Fly   544 ELVRKQQEHLVEFEKQRRRLAHQQQIQTQQKQYQEKQKLMLQQQQQQQQQQQQQQQQQQQQQLQQ 608
            |||.||||.|.||||||      |||||||||||||||||||||.|||||||:.||||       
  Fly   264 ELVLKQQEQLEEFEKQR------QQIQTQQKQYQEKQKLMLQQQPQQQQQQQELQQQQ------- 315

  Fly   609 PQQQQQQQQQQQQEQQQLQLKPHHLQQLQL---------QLLQQQQKKAQIP 651
             :.||||:|:|||..|||.|||||:|||||         |||||||.|.:.|
  Fly   316 -ELQQQQEQEQQQLLQQLHLKPHHVQQLQLQMQLLQQQRQLLQQQQHKPENP 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cfp1NP_572556.1 PHD_Cfp1 62..107 CDD:277028 40/44 (91%)
zf-CXXC 178..218 CDD:251032 2/39 (5%)
zf-CpG_bind_C 300..532 CDD:289071 26/231 (11%)
CG17440NP_572555.1 PHD_Cfp1 40..85 CDD:277028 40/44 (91%)
zf-CpG_bind_C 231..>278 CDD:289071 38/256 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439006
Domainoid 1 1.000 79 1.000 Domainoid score I8604
eggNOG 1 0.900 - - E1_KOG1632
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D351589at33208
OrthoFinder 1 1.000 - - FOG0003492
OrthoInspector 1 1.000 - - mtm6560
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR46174
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3950
98.850

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