DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cfp1 and Cxxc1

DIOPT Version :9

Sequence 1:NP_572556.1 Gene:Cfp1 / 31880 FlyBaseID:FBgn0030121 Length:663 Species:Drosophila melanogaster
Sequence 2:XP_038952569.1 Gene:Cxxc1 / 291440 RGDID:1310755 Length:702 Species:Rattus norvegicus


Alignment Length:540 Identity:175/540 - (32%)
Similarity:250/540 - (46%) Gaps:148/540 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 YCICRSSDCSRFMIGCDGCEEWYHGDCIGITEKEAKHIKQYYCRRCKKENPELQTIFR-LVATER 125
            |||||..|.:.||||||.|.||:|||||.||||.||.|:::|||.|::::|:|:..:| ....||
  Rat    28 YCICRKPDINCFMIGCDNCNEWFHGDCIRITEKMAKAIREWYCRECREKDPKLEIRYRHKKCRER 92

  Fly   126 AAASNAASTSLNAPG--------------VGPSGAAPAAAPVASATTSQQAPPPTTAAAKRKNSS 176
            ..:....|...:..|              .|......|.....||:..:.:|.|..|...:.:..
  Rat    93 DGSERDGSEPRDEGGGRKRPASDPELQRRAGSGTGVGAMLARGSASPHKSSPQPLVATPSQHHQQ 157

  Fly   177 ARE-------PKMGKRCGTCEGCRR-PNCNQCDACR--VRVGH----KPRCIFRTCVVQAATVLK 227
            .::       .:..:.||.||.||| .:|..||.||  .:.|.    :.:|..|.|.::|....|
  Rat   158 QQQQQQQQQIKRSARMCGECEACRRTEDCGHCDFCRDMKKFGGPNKIRQKCRLRQCQLRARESYK 222

  Fly   228 ----------ESQA---------TQAGPSR-------KREKAAPKSRNVQVGPRA-ASPE----- 260
                      .|:|         ||..|.:       :.::....|..|:..|.| |:||     
  Rat   223 YFPSSLSPVTPSEALPRPRRPPPTQQQPQQSQKLGRIREDEGTVLSSVVKEPPEATATPEPLSDE 287

  Fly   261 ------------------------------IFLNPELQ--------------------------- 268
                                          .||:|.|:                           
  Rat   288 DLALDPDLYQDFCAGAFDDHVPWMSDAEESPFLDPALRKRAVKVKHVKRREKKSEKKVMERKEER 352

  Fly   269 --------------------------GIRQCYGPNCCSHARPQSKYCSDKCGFNLATKRIFQVLP 307
                                      .:.||.||.|...|:|.||||||.||..||..||:::||
  Rat   353 YKRHRQKQKHKDKWKHPERADAKDPASLPQCLGPGCVRAAQPGSKYCSDDCGMKLAANRIYEILP 417

  Fly   308 QRLQEWNLTPSRAAEETRKHLDNIRHKQSLVRFALAELEKRSEELNMVVERAKRSSI--DTLGSQ 370
            ||:|:|..:|..|.|..:|.|:.||.:|...|..|.|:|:|..||..::.|||:.::  |...::
  Rat   418 QRIQQWQQSPCIAEEHGKKLLERIRREQQSARTRLQEMERRFHELEAIILRAKQQAVREDEENNE 482

  Fly   371 DTADMEDEQSMYCITCGHEIHSRTAIKHMEKCFNKYESQASFGSIFKTRMEG-NNMFCDFYNPAS 434
            :.:|..|.| ::|::|||.|:.|.|::|||:|:.|||||.||||::.||:|| ..:|||.|||.|
  Rat   483 NDSDDTDLQ-IFCVSCGHPINPRVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQS 546

  Fly   435 KTYCKRLRVLCPEHSKDPKV 454
            |||||||:|||||||:||||
  Rat   547 KTYCKRLQVLCPEHSRDPKV 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cfp1NP_572556.1 PHD_Cfp1 62..107 CDD:277028 30/44 (68%)
zf-CXXC 178..218 CDD:251032 15/53 (28%)
zf-CpG_bind_C 300..532 CDD:289071 79/158 (50%)
Cxxc1XP_038952569.1 PHD_Cfp1 28..73 CDD:277028 30/44 (68%)
zf-CXXC 167..213 CDD:366873 15/45 (33%)
zf-CpG_bind_C 410..>566 CDD:403474 77/156 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 272 1.000 Domainoid score I1736
eggNOG 1 0.900 - - E1_KOG1632
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32221
Inparanoid 1 1.050 427 1.000 Inparanoid score I1686
OMA 1 1.010 - - QHG48041
OrthoDB 1 1.010 - - D351589at33208
OrthoFinder 1 1.000 - - FOG0003492
OrthoInspector 1 1.000 - - otm45525
orthoMCL 1 0.900 - - OOG6_107072
Panther 1 1.100 - - LDO PTHR46174
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3950
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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