DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cfp1 and Fbxl19

DIOPT Version :9

Sequence 1:NP_572556.1 Gene:Cfp1 / 31880 FlyBaseID:FBgn0030121 Length:663 Species:Drosophila melanogaster
Sequence 2:XP_036008913.1 Gene:Fbxl19 / 233902 MGIID:3039600 Length:696 Species:Mus musculus


Alignment Length:142 Identity:34/142 - (23%)
Similarity:51/142 - (35%) Gaps:29/142 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 PPTTAAAKRKNSSAREPKMGKRCGTCEGCRRPNCNQCDACR--VRVG----HKPRCIFRTCVVQA 222
            ||.:::::...:.||..:  .||..|..|.|..|..|..||  .:.|    .|..|:.|.|   .
Mouse    21 PPMSSSSRGPGAGARRRR--TRCRRCRACVRTECGDCHFCRDMKKFGGPGRMKQSCLLRQC---T 80

  Fly   223 ATVLKES-----------QATQAGPSRKREKAAPKSR--NVQVGP---RAASPEIFLNPELQGIR 271
            |.||..:           :.|..|...|...:..:..  |..|.|   :....|..:|.|:....
Mouse    81 APVLPHTAVCLLCGEAGKEDTVEGEDEKFSLSLMECTICNEIVHPGCLKMGKAEGVINSEIPNCW 145

  Fly   272 QCYGPNCCSHAR 283
            :|  |.|....|
Mouse   146 EC--PRCTQEGR 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cfp1NP_572556.1 PHD_Cfp1 62..107 CDD:277028
zf-CXXC 178..218 CDD:251032 14/45 (31%)
zf-CpG_bind_C 300..532 CDD:289071
Fbxl19XP_036008913.1 zf-CXXC <52..79 CDD:366873 8/26 (31%)
PHD_FXL19 89..150 CDD:277115 11/62 (18%)
F-box-like 426..467 CDD:403981
AMN1 468..667 CDD:187754
leucine-rich repeat 488..511 CDD:275381
leucine-rich repeat 512..535 CDD:275381
leucine-rich repeat 573..600 CDD:275381
leucine-rich repeat 601..627 CDD:275381
leucine-rich repeat 631..655 CDD:275381
leucine-rich repeat 656..680 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1632
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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