DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cfp1 and Bptf

DIOPT Version :9

Sequence 1:NP_572556.1 Gene:Cfp1 / 31880 FlyBaseID:FBgn0030121 Length:663 Species:Drosophila melanogaster
Sequence 2:XP_006532738.1 Gene:Bptf / 207165 MGIID:2444008 Length:3158 Species:Mus musculus


Alignment Length:102 Identity:43/102 - (42%)
Similarity:59/102 - (57%) Gaps:13/102 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VSKQKEEIRREIAREFDLPERKSKIATI----LKQEDQAYCICRSS-DCSRFMIGCDGCEEWYHG 86
            |:.||.  :||  .|.|...:|.|:.:.    .|::.:.||||::. |.|:|.||||.|..||||
Mouse  2888 VTSQKR--KRE--EEKDSKSKKKKMISTTSKEAKKDTRLYCICKTPYDESKFYIGCDLCTNWYHG 2948

  Fly    87 DCIGITEKEAKHIKQYYCRRCKK----ENPELQTIFR 119
            :|:||||||||.:..|.|..||:    .:.||..|.|
Mouse  2949 ECVGITEKEAKKMDVYICNDCKRAQEGSSEELYCICR 2985

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cfp1NP_572556.1 PHD_Cfp1 62..107 CDD:277028 27/45 (60%)
zf-CXXC 178..218 CDD:251032
zf-CpG_bind_C 300..532 CDD:289071
BptfXP_006532738.1 DDT 253..309 CDD:367184
WHIM1 356..393 CDD:373966
PHD1_BPTF 404..446 CDD:277034
WSD 468..536 CDD:373967
MDN1 <578..749 CDD:227596
DUF5585 <2038..2345 CDD:375359
Med15 <2246..>2609 CDD:312941
TPH 2696..>2836 CDD:372768
PHD2_3_BPTF 2923..2969 CDD:277035 27/45 (60%)
PHD2_3_BPTF 2981..3027 CDD:277035 2/5 (40%)
Bromo_gcn5_like 3043..3143 CDD:99941
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1632
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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