DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cfp1 and si:ch73-181d5.4

DIOPT Version :9

Sequence 1:NP_572556.1 Gene:Cfp1 / 31880 FlyBaseID:FBgn0030121 Length:663 Species:Drosophila melanogaster
Sequence 2:XP_003201203.2 Gene:si:ch73-181d5.4 / 100538306 ZFINID:ZDB-GENE-100922-118 Length:2142 Species:Danio rerio


Alignment Length:784 Identity:133/784 - (16%)
Similarity:239/784 - (30%) Gaps:228/784 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KYKKTVSFTRCTAIIFLTTKEVSKQKEEIRREIAREFDLPERKSKIATILKQEDQAY----CICR 66
            :|...:..:....:..:.....|.::|.....:...|:...|...::.|.|.....|    |..:
Zfish  1030 EYVDLIKTSEAKELSLIRFHPASDEEEVAYVSLFSYFNSRRRFGVVSNICKHIKDLYLIPLCTKQ 1094

  Fly    67 SSDCSRFMIGCDGCEEWYHGDCIGITEKEAKHIKQYYCRRCKKENPELQTIFRLVATERAAAS-- 129
            |...:...|...|.|:.:....||:.          .|::.|..:...|.     |.|:.:.|  
Zfish  1095 SIPAALLPIEGPGLEQDHPNLLIGLA----------VCQKLKHPDRPPQD-----AAEKKSKSLI 1144

  Fly   130 ---NAASTSLNAPGVGPSGAAPAAAPVASATTSQQAPPPTTAAAKRKNSSAREPKMGKRCGTCE- 190
               ::..||:|..|..|:.|..|..    ...|..:..|::::.     ...:|.|....||.: 
Zfish  1145 YKESSTPTSINDLGPYPTKACDADV----FLNSHSSGSPSSSSV-----PVSKPSMSVNMGTSKD 1200

  Fly   191 -------------GCRRP--NCNQC----DACRVRVGHKPRCI---------FRTCVVQAATVLK 227
                         |.::|  :.|:|    |..:...|   :|:         :...|...|.|  
Zfish  1201 STTPLQTILNTLFGQKKPLSDLNECKKVDDVQQEDAG---KCVDDMPYDPEDYDPAVSNEAMV-- 1260

  Fly   228 ESQATQAGPSRKREKAAPKSRNVQVGPRAASPEIFLNPELQGIRQCYGPNCCSHARPQSKYCSDK 292
                         ..:.||...:::.|.|.:.|....|        |.        |:.:||:..
Zfish  1261 -------------SLSPPKPVELKIPPLAINNEDDDRP--------YD--------PEEEYCTID 1296

  Fly   293 CGFNLATKRIFQVLPQRLQEWNLTPSRAA--------------EETRKHLDN-----------IR 332
            .|..|.:.     ||:..:..::.....|              ||.:.:|.|           .:
Zfish  1297 HGETLRSN-----LPKVSEAKSVEKPPTANTDIAYDPEDESVFEEMQNYLTNNAIPHKPTVCLSK 1356

  Fly   333 HKQSLVRFALAELEKRSEELNMVVERAKRSSIDTLGSQDTADMEDEQSMYCITCGHEIHSRTAIK 397
            :|..:....|:|.:|..||||..:|..||..     .:.|..:..::....::..| .....|:.
Zfish  1357 YKDDISTATLSEQQKILEELNRQIEEQKRQL-----EEQTETLRLQKEAIGLSMAH-FSVSDALM 1415

  Fly   398 HMEKCFNKYESQASFGSIFKTRMEGNNMFCDFYNPASKTYCKRLRVLCPEHSKDPKVNDTDVCG- 461
            .....|.:.|::....:.|...:...       :|.          :|.:.|:|..|::.:..| 
Zfish  1416 SPPTQFGREETEIETTAYFSMNIHNK-------DPR----------ICRKASQDVSVDNAECEGI 1463

  Fly   462 ---SPLVNNVFNPTGEFCRAPKKNCFK---HYAWEKIRRAE--IDLERVRQWLKMDDLMEQERVM 518
               |.......|........|||...:   |....|...:|  .|..|.....:|....|.....
Zfish  1464 EKESAQKQETKNVASNKSLIPKKETLEESPHQQNTKSSHSEKKADSRRSTPSSRMKSRHEHRSHH 1528

  Fly   519 RQQLTSRANLLG---------------------------------------LMLHSTYNHEVMDE 544
            .::.:|||:..|                                       ...|..::.:....
Zfish  1529 HEKSSSRASHTGRPSKDVSDKHYRRRTTTERPSRGSYGDRKRASSSSTSSRKSYHRHHHRDSPSR 1593

  Fly   545 LVRKQQEHLVEFEKQRRRLAHQQQIQTQQKQYQEKQKLMLQQQQQQQ------------------ 591
            ..|:.........|||.:.|.....|:.:.:.||...|:....|.:|                  
Zfish  1594 YSRRSHSSSNSLSKQRDKSAQGDTGQSGKIEQQESGALLEDSTQSEQVSDCLTVHPPPASVKVQS 1658

  Fly   592 ---QQQQQQQQQQQQQQLQQPQQQQQQQQQQQQEQQQLQLKPHHL-QQLQLQLLQQQQKKAQIPQ 652
               :...:|..:.||..|...|.:.:|.|..|..|..||.:|..| .:.|.||:         |.
Zfish  1659 ETTKPTDEQLGEDQQDGLLTAQDEAEQNQALQTSQNSLQSQPGKLFDKTQAQLM---------PC 1714

  Fly   653 KTQI 656
            ||.:
Zfish  1715 KTDV 1718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cfp1NP_572556.1 PHD_Cfp1 62..107 CDD:277028 9/48 (19%)
zf-CXXC 178..218 CDD:251032 11/68 (16%)
zf-CpG_bind_C 300..532 CDD:289071 46/304 (15%)
si:ch73-181d5.4XP_003201203.2 PHD_SHPRH 211..253 CDD:277022
TFIIS_M 626..717 CDD:284835
PHA03255 820..>963 CDD:165513
SPOC 983..1089 CDD:285043 8/58 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1632
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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