DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31548 and RDH8

DIOPT Version :10

Sequence 1:NP_730974.1 Gene:CG31548 / 318794 FlyBaseID:FBgn0051548 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_056540.3 Gene:RDH8 / 50700 HGNCID:14423 Length:311 Species:Homo sapiens


Alignment Length:265 Identity:74/265 - (27%)
Similarity:114/265 - (43%) Gaps:49/265 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNFAGKVVLITGASSGIGAATAIKFA-----KYGACLALN--GRNVENLKKVAAECSKVSQSQPA 58
            |..|.:.|||:|.|||||...|::.|     :|.....:.  |:. |.|:..|.|          
Human     1 MAAAPRTVLISGCSSGIGLELAVQLAHDPKKRYQVVATMRDLGKK-ETLEAAAGE---------- 54

  Fly    59 LVVGDIAKEADTQRIWSETLQQ-----YGKLDVLVNNAGIIETGTIETTSLEQYDRVMNTNLRAI 118
             .:|.....|.......|::.|     .|::||||||||:...|.:|..||.....|.:||....
Human    55 -ALGQTLTVAQLDVCSDESVAQCLSCIQGEVDVLVNNAGMGLVGPLEGLSLAAMQNVFDTNFFGA 118

  Fly   119 YHLTMLATPELVKTK-GNIVNVSSVNGIRSFPGVL---AYNISKMGVDQFTRCVALELAAKGVRV 179
            ..|.....|.:.:.: |:||.:|||.|::   ||:   .|..||..::.|...:|::|....:.:
Human   119 VRLVKAVLPGMKRRRQGHIVVISSVMGLQ---GVIFNDVYAASKFALEGFFESLAIQLLQFNIFI 180

  Fly   180 NCVNPGVTVTNLHAR----------GGMDAETYKKFLE-----HSKTTHALGR-PGDVKEVAAAI 228
            :.|.||..||....:          .|.|.||...|.:     ..|...::|: |.||  |.|.:
Human   181 SLVEPGPVVTEFEGKLLAQVSMAEFPGTDPETLHYFRDLYLPASRKLFCSVGQNPQDV--VQAIV 243

  Fly   229 AFLAS 233
            ..::|
Human   244 NVISS 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31548NP_730974.1 Rossmann-fold NAD(P)(+)-binding proteins 3..253 CDD:473865 73/263 (28%)
RDH8NP_056540.3 type1_17beta-HSD-like_SDR_c 6..262 CDD:187666 72/260 (28%)

Return to query results.
Submit another query.