DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31548 and cbr4

DIOPT Version :9

Sequence 1:NP_730974.1 Gene:CG31548 / 318794 FlyBaseID:FBgn0051548 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_991219.2 Gene:cbr4 / 402954 ZFINID:ZDB-GENE-040426-1796 Length:237 Species:Danio rerio


Alignment Length:248 Identity:83/248 - (33%)
Similarity:127/248 - (51%) Gaps:22/248 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KVVLITGASSGIGAATAIKFAKYGACLALNGRNVENLKKVAAECSKVSQSQPAL----VVGDIAK 66
            ::.::.|.|.|||.|.:...|:.|..:.|..||     |.||:.:  :||.|..    :..|::|
Zfish     3 RLAVVFGGSRGIGRAVSKLLAQRGHRIVLLSRN-----KEAAQAT--AQSLPGENHLGLSCDVSK 60

  Fly    67 EADTQRIWSETLQQYGKLDVLVNNAGIIETGTIETTSLEQYDRVMNTNLRAIYHLTMLATPELVK 131
            |.:.|:.:....:..|.:..|||.|||.....:..:..|....|::|||.........|...::.
Zfish    61 EEEVQKAFETINKTCGTVGFLVNAAGINRDALLLRSKSEDMLSVLHTNLLGSMLTCKAAVRNMLS 125

  Fly   132 TKGNIVNVSSVNGIRSFPGVLAYNISKMGVDQFTRCVALELAAKGVRVNCVNPGVTVTNLHARGG 196
            ..|.|||:.||.|::...|...|:.||.|::.|||.:|.|:|::.:|||.|.||:..|::.|  |
Zfish   126 HGGAIVNIGSVVGVKGNAGQCVYSASKAGLEGFTRSLAKEVASRNIRVNLVAPGLIHTDMTA--G 188

  Fly   197 MDAETYKKFLEHSKTTHALGRPGDVKEVAAAIAFLASDEASFSTGVSLPVDGG 249
            : ||      |.:..|..|||.|:..|||.|:.||.  |:.:.||..|.||||
Zfish   189 L-AE------EAAVRTIPLGRFGEPAEVAQAVLFLL--ESPYITGQILLVDGG 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31548NP_730974.1 fabG 1..250 CDD:235975 83/248 (33%)
NADB_Rossmann 3..253 CDD:304358 83/248 (33%)
cbr4NP_991219.2 fabG 1..235 CDD:235546 83/248 (33%)
NADB_Rossmann 3..233 CDD:304358 83/248 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000019
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.