DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31548 and Hsdl1

DIOPT Version :9

Sequence 1:NP_730974.1 Gene:CG31548 / 318794 FlyBaseID:FBgn0051548 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_001020067.1 Gene:Hsdl1 / 361418 RGDID:1308433 Length:330 Species:Rattus norvegicus


Alignment Length:230 Identity:57/230 - (24%)
Similarity:109/230 - (47%) Gaps:26/230 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GKVVLITGASSGIGAATAIKFAKYGACLALNGRNVENLKKVAAECSKVSQSQPALVVGDIAKEAD 69
            |:..:|:||:.|||.|.|.:.|.:|..:.|..:..|.|:.||...:...:.:..::|.|.::..:
  Rat    67 GRWAVISGATDGIGKAYAEELASHGLNIILISQEEEKLQAVAKHIADTYRVETLVLVADFSRGRE 131

  Fly    70 TQRIWSETLQQYGKLDVLVNNAGI----------IETGTIETTSLEQYDRVMNTNLRAIYHLTML 124
            ......|.|:. ..:.:|||:.|.          :...||       :| ::|.|:.|...:..:
  Rat   132 IYAPIREALRD-RDIGILVNDVGAFYPYPQYFSQVPEDTI-------WD-IVNVNIAAASLMVHI 187

  Fly   125 ATPELV-KTKGNIVNVSSVNGIRSFPGVLAYNISKMGVDQFTRCVALELAAKGVRVNCVNPGVTV 188
            ..|.:| :.||.||.|||.:..:..|.:.|::.||..:|.|:|.:..|.|:||:.|..:.|....
  Rat   188 VLPGMVERKKGAIVTVSSGSCCKPTPQLAAFSASKAYLDHFSRALQYEYASKGIFVQSLIPFYVT 252

  Fly   189 TNLHARGGM------DAETYKKFLEHSKTTHALGR 217
            :::.|.|..      .|.:.:.:.:|:.:|..:.:
  Rat   253 SSVTAPGSFLRRCPWLAPSPRVYAQHAVSTLGISK 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31548NP_730974.1 fabG 1..250 CDD:235975 57/230 (25%)
NADB_Rossmann 3..253 CDD:304358 57/230 (25%)
Hsdl1NP_001020067.1 Required for mitochondria translocation. /evidence=ECO:0000250 2..82 7/14 (50%)
17beta-HSD1_like_SDR_c 67..309 CDD:187614 57/230 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D913128at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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