DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17440 and cxxc1

DIOPT Version :10

Sequence 1:NP_572555.1 Gene:CG17440 / 31879 FlyBaseID:FBgn0030120 Length:366 Species:Drosophila melanogaster
Sequence 2:XP_031747257.1 Gene:cxxc1 / 613066 XenbaseID:XB-GENE-5910691 Length:609 Species:Xenopus tropicalis


Alignment Length:417 Identity:96/417 - (23%)
Similarity:157/417 - (37%) Gaps:157/417 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 YCICRSSDCSRFMIGCDGCEEWYHGDCIEITEKDAEHIKNYYCRRCKKENPELQTIFR------- 97
            |||||..|.:.||||||.|.||:||.||.||||.|:.|:.:||.:|:.::|.|:..:|       
 Frog    25 YCICRKPDINCFMIGCDNCNEWFHGHCINITEKMAKAIREWYCVQCRDKHPHLEIKYRHKKSKER 89

  Fly    98 -----------LVATERAAASNAASTSLNAPGV-------------------------------- 119
                       ....|:..:.:.:|:|...|..                                
 Frog    90 ERETEKDENEETAKNEKKKSGSTSSSSNKVPRQQIKRSARMCGECEACSRTEDCGQCDFCRDMKK 154

  Fly   120 --GP------------------SGAAPA---------AAPVAPA-----------------TTSQ 138
              ||                  |..||.         :|||.|.                 :..:
 Frog   155 FGGPNKIRQKCRLRQCQVRARVSRRAPVSPGAEWPLLSAPVVPGYSILLLQKMLRVKDDDLSLFR 219

  Fly   139 QAPPPTTAAAKRKNSSAQ-EPKESQPTQAG----------------------------------T 168
            ..|.|::.|....:.... :|:..|...||                                  .
 Frog   220 DTPEPSSLAGSLSDDDLPLDPELYQELCAGGAFDDHNLPWLSDTDDTPFLDSVMRKRAVKVKHVK 284

  Fly   169 KRDKAAPKTSNVQV------------SPRAVSPEIFLNPELQGIQQCHGPNCCSHARPQSKYCSD 221
            :|:|.|.|..:.:.            :..:...||   .:...::||.||:|...||..||||||
 Frog   285 RREKKADKKKDEKYKRHKQKQRHKDKTKHSERTEI---RDFSSLRQCLGPSCVQPARSSSKYCSD 346

  Fly   222 ECGSNLAIERLFQILPQQMQEWNITPSRAAEETRKHLELNMDELVLKQQEQLEEFEKQRQQIQTQ 286
            :||..||..|:::||||::|:|..:|..|.|:.:|.|     |.:.::|:|      .|.::|..
 Frog   347 DCGMKLAANRIYEILPQRIQQWQQSPCVAEEQGKKLL-----ERIRREQQQ------ARTKLQNM 400

  Fly   287 QKQYQEKQKLMLQQQPQQQQQQQELQQ 313
            :.::.|.:.|:.:.:.||.::.:|..:
 Frog   401 ESRFHELEALISKAKQQQIREDEETNE 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17440NP_572555.1 PHD_Cfp1 40..85 CDD:277028 27/44 (61%)
CpG_bind_C 228..>278 CDD:463514 16/49 (33%)
cxxc1XP_031747257.1 PHD_Cfp1 25..70 CDD:277028 27/44 (61%)
zf-CXXC 123..170 CDD:366873 2/46 (4%)
CpG_bind_C 353..589 CDD:463514 23/86 (27%)

Return to query results.
Submit another query.