DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31528 and RAD23A

DIOPT Version :10

Sequence 1:NP_730833.1 Gene:CG31528 / 318785 FlyBaseID:FBgn0051528 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_005044.1 Gene:RAD23A / 5886 HGNCID:9812 Length:363 Species:Homo sapiens


Alignment Length:182 Identity:43/182 - (23%)
Similarity:71/182 - (39%) Gaps:39/182 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LVFAGQVLSDEGTI-DSRGIVSGVTVHVVCRAEAANS----PSPTPIAATKRSKPSERLMRSWQS 107
            |::||::|||:..| |.|.......|.:|.:.:|...    |..:|.||.:.|       .|:..
Human    48 LIYAGKILSDDVPIRDYRIDEKNFVVVMVTKTKAGQGTSAPPEASPTAAPESS-------TSFPP 105

  Fly   108 AHIAFLQQEPDVLRSLLQADPRIRSLLDENAAMRHYLNSDQNLREMLSLAFSPAKQELGRRRDLH 172
            |..:.:...|...|       ..:|..:|:|.    ..|.:::...:     |:....||..|  
Human   106 APTSGMSHPPPAAR-------EDKSPSEESAP----TTSPESVSGSV-----PSSGSSGREED-- 152

  Fly   173 ISRMEFVPGG-YKVLSRLNYCMLQAYEDNVAMAFQQASQGAKTSSNPQRGLE 223
             :....|.|. |:.:  |...|...||....:|..:||.     :||.|.:|
Human   153 -AASTLVTGSEYETM--LTEIMSMGYERERVVAALRASY-----NNPHRAVE 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31528NP_730833.1 Ubl1_cv_Nsp3_N-like 7..77 CDD:475130 11/29 (38%)
UBA_like_SF 299..335 CDD:473871
RAD23ANP_005044.1 rad23 3..361 CDD:273167 43/182 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..160 19/104 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..227
HIV-1 vpr binding 319..363
Blue background indicates that the domain is not in the aligned region.

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