DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31528 and RpS27A

DIOPT Version :10

Sequence 1:NP_730833.1 Gene:CG31528 / 318785 FlyBaseID:FBgn0051528 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_476778.1 Gene:RpS27A / 34420 FlyBaseID:FBgn0003942 Length:156 Species:Drosophila melanogaster


Alignment Length:83 Identity:20/83 - (24%)
Similarity:36/83 - (43%) Gaps:9/83 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SGRVETVTLRQNELIRNLRVLVAVRFEQAISRIILVFAGQVLSDEGTIDSRGIVSGVTVHVVCRA 78
            :|:..|:.:..::.|.|::..:..:......:..|:|||:.|.|..|:....|....|:|:|.|.
  Fly     9 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73

  Fly    79 EAANSPSPTPIAATKRSK 96
            ..         .|.||.|
  Fly    74 RG---------GAKKRKK 82

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31528NP_730833.1 Ubl1_cv_Nsp3_N-like 7..77 CDD:475130 15/62 (24%)
UBA_like_SF 299..335 CDD:473871
RpS27ANP_476778.1 Ubl_ubiquitin 1..76 CDD:340501 16/75 (21%)
Ribosomal_S27 103..147 CDD:460261
Blue background indicates that the domain is not in the aligned region.

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