DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31524 and P4ha2

DIOPT Version :9

Sequence 1:NP_733379.2 Gene:CG31524 / 318781 FlyBaseID:FBgn0051524 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001101745.1 Gene:P4ha2 / 360526 RGDID:1309673 Length:535 Species:Rattus norvegicus


Alignment Length:550 Identity:173/550 - (31%)
Similarity:261/550 - (47%) Gaps:54/550 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VIFFLSLSMGQIEATQPRFARSVVNMDDLLNMEDDLVSKLEGYAEKLSYKANTIRWGIQQMREQL 74
            |:..|....|.:...|..|..|:.:|.||:..|.|||..|:.|......|.:.|:....:|....
  Rat     5 VLVLLMSWFGVLSWVQAEFFTSIGHMTDLIYAEKDLVQSLKEYILAEEAKLSKIKSWASKMEALT 69

  Fly    75 DKSKKEQSFDL---FNRYSFIRHMQADWLMWKQYLDKPVIRD-------ELNYKQMDNLRMPQEL 129
            .||..:....|   .|.|..::.:..||    ..|...|::|       .|:.::.   ..|.:.
  Rat    70 SKSAADPEGYLAHPVNAYKLVKRLNTDW----PALGDLVLQDAAAGFVANLSVQRQ---FFPTDE 127

  Fly   130 DLFDASEAIRRMQATYAMLSNDIAEGFLDGVQYTSKLSPIDCLAMGRHLMNQSRWTIAEQWILAG 194
            |...|:.|:.|:|.||.:..:.|:.|.|.|.:|.:.||..||..|||...|:..:.....|:...
  Rat   128 DESGAARALMRLQDTYKLDPDMISRGELPGTKYQAMLSVDDCFGMGRSAYNEGDYYHTVLWMEQV 192

  Fly   195 IKAQDRKGPQTEMILLRGPTKAELFRTLGKVRFERRNEEGALKAYQAALKHSP-HD-----LEIF 253
            :|..| .|.:..:      ||:.:...|....|:..:...|::..:..|...| |:     |..|
  Rat   193 LKQLD-AGEEATV------TKSLVLDYLSYAVFQLGDLHRAVELTRRLLSLDPSHERAGGNLRYF 250

  Fly   254 QEYQNLKR-RVLT------LSPSEPIREEPNDDIEEMEL-PPCCSGRCEG----PRKLNRLYCVY 306
            :.....:| :.|:      |:..|.:.|.|.|.:.|.:: ...|.|  ||    ||:..||:|.|
  Rat   251 ERLLEEERGKSLSNQTDAGLASQENLYERPVDYLPERDVYESLCRG--EGIKMTPRRQKRLFCRY 313

  Fly   307 ---NCVTAPFLRLAPIKTEILSVDPFVILLHDMVSHKEGALIRSSSKNQILPSETVN--AANEFE 366
               |.|  |.|.:||.|.|.....|.::..:|::|.:|...|:..:|.: |...||.  ......
  Rat   314 HHGNRV--PQLLIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPK-LARATVRDPKTGVLT 375

  Fly   367 IAKFRTSKSVWFDSDANEATLKLTQRLGEATGLDMKHSEPFQVINYGIGGVFESHFDTSLADE-D 430
            :|.:|.|||.|.:.|.:....::.:|:...|||.:|.:|..||.|||:||.:|.|||.|.:|| |
  Rat   376 VASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDERD 440

  Fly   431 RFVN-GYIDRLATTLFYLNDVPQGGATHFPGLNITVFPKFGTVLMWYNLHTEGMLHVRTMHTGCP 494
            .|.. |..:|:||.|.|::||..||||.||.|...::||.||.:.||||...|....||.|..||
  Rat   441 AFKRLGTGNRVATFLNYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACP 505

  Fly   495 VIVGSKWVVSKWIDDKGQEFRRPCLRSRLD 524
            |:||.|||.:||..::||||.|||..:.:|
  Rat   506 VLVGCKWVSNKWFHERGQEFLRPCGTTEVD 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31524NP_733379.2 P4Ha_N 31..157 CDD:285528 34/135 (25%)
TPR_11 215..>259 CDD:290150 9/49 (18%)
TPR_2 216..249 CDD:285020 5/33 (15%)
P4Hc 340..507 CDD:214780 71/170 (42%)
P4ha2NP_001101745.1 P4Ha_N 27..104 CDD:400573 20/80 (25%)
P4Hc 346..519 CDD:214780 73/173 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X129
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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