DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31524 and p4ha1b

DIOPT Version :9

Sequence 1:NP_733379.2 Gene:CG31524 / 318781 FlyBaseID:FBgn0051524 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_999856.1 Gene:p4ha1b / 100003675 ZFINID:ZDB-GENE-030131-4089 Length:536 Species:Danio rerio


Alignment Length:538 Identity:163/538 - (30%)
Similarity:264/538 - (49%) Gaps:63/538 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 FARSVVNMDDLLNMEDDLVSKLEGYAEKLSYKANTIRWGIQQMREQLDK--------SKKEQSF- 83
            |..|...|.|||..|.|||:.|:.|.::...:       ::|::|..||        ::..:.| 
Zfish    21 FFTSTGQMTDLLYAEKDLVTSLKEYIKQEENR-------LEQVKEWADKLDSLTITATQDPEGFL 78

  Fly    84 -DLFNRYSFIRHMQADWLMWKQYLDKPVIRDELNYKQMDNLRM-----PQELDLFDASEAIRRMQ 142
             ...|.:..::.:.::|    ..|:..|::|..| ..:.||.:     |.:.|...|::|:.|:|
Zfish    79 GHPVNAFKLMKRLNSEW----SDLENLVLKDTTN-GFISNLTVQRQYFPTDEDQTGAAKALLRLQ 138

  Fly   143 ATYAMLSNDIAEGFLDGVQYTSKLSPIDCLAMGRHLMNQSRWTIAEQWILAGIKAQDRKGPQTEM 207
            .||.:.:|.|:.|.|.||.:.|:::..||..:|:...:.:.:...|.|:...:...| :|.::.:
Zfish   139 DTYQLSANAISSGDLPGVVHKSRMTVEDCYELGKIAYSDADYYHTELWMAQALSQLD-EGEESPI 202

  Fly   208 ILLRGPTKAELFRTLGKVRFERRNEEGALKAYQAALKHSPH------DLEIFQEYQNLKRRVL-- 264
                  .|..:...|....:::...:.||:..:..||..|:      :|:.| |:|..|:|..  
Zfish   203 ------DKVTVMDYLSYAIYQQGELDRALELTKRMLKLDPNHHRANGNLKYF-EFQLEKQRKAEN 260

  Fly   265 ---------TLSPSEPIREEPNDDI-EEMELPPCCSGRCEG----PRKLNRLYCVY-NCVTAPFL 314
                     .|...:..|:...|.: |..:....|.|  ||    ||:.:||:|.| |....|.|
Zfish   261 EKKEEDQKRVLDKRDAQRKRSKDPLPERKKYERLCRG--EGIKLTPRRQSRLFCRYSNNNRNPRL 323

  Fly   315 RLAPIKTEILSVDPFVILLHDMVSHKEGALIRSSSKNQILPSETVN-AANEFEIAKFRTSKSVWF 378
            .|||:|.|.....|.::..|:::|..|...::..:|.::..:...| .....|.|.:|.|||.|.
Zfish   324 LLAPVKQEDEWDRPRIVRYHEIISDSEIETVKEMAKPRLRRATISNPITGVLETAPYRISKSAWL 388

  Fly   379 DSDANEATLKLTQRLGEATGLDMKHSEPFQVINYGIGGVFESHFDTSLADE-DRFVN-GYIDRLA 441
            ....:....::.||:.:.|||:|..:|..||.|||:||.:|.|||....|| |.|.. |..:|:|
Zfish   389 SGYEHSTIERINQRIEDVTGLEMDTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIA 453

  Fly   442 TTLFYLNDVPQGGATHFPGLNITVFPKFGTVLMWYNLHTEGMLHVRTMHTGCPVIVGSKWVVSKW 506
            |.|||::||..||||.|..:...|:||.||.:.||||...|.....|.|..|||:||:|||.:||
Zfish   454 TWLFYMSDVSAGGATVFTDVGAAVWPKKGTAVFWYNLFPSGEGDYSTRHAACPVLVGNKWVSNKW 518

  Fly   507 IDDKGQEFRRPCLRSRLD 524
            |.::||||||||..|.::
Zfish   519 IHERGQEFRRPCALSEVE 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31524NP_733379.2 P4Ha_N 31..157 CDD:285528 35/140 (25%)
TPR_11 215..>259 CDD:290150 11/49 (22%)
TPR_2 216..249 CDD:285020 6/38 (16%)
P4Hc 340..507 CDD:214780 67/169 (40%)
p4ha1bNP_999856.1 P4Ha_N 24..153 CDD:285528 35/140 (25%)
TPR repeat 164..199 CDD:276809 7/35 (20%)
TPR_16 168..238 CDD:290168 12/76 (16%)
TPR repeat 204..234 CDD:276809 5/29 (17%)
P4Hc 347..520 CDD:214780 69/172 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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