DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17754 and AT1G67480

DIOPT Version :10

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_176915.1 Gene:AT1G67480 / 843069 AraportID:AT1G67480 Length:376 Species:Arabidopsis thaliana


Alignment Length:330 Identity:77/330 - (23%)
Similarity:127/330 - (38%) Gaps:78/330 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   338 SIESYCPRLDKW----TPWKHMTGRRLQFGAAVMEDKLILV----GGRDGLKTLNTVESLDLNTM 394
            |:.|.|   .||    ...:.:|.|||   |.::|:.|.::    ||:|     |..|.:|....
plant    62 SMGSVC---KKWRFVVQSKEFITVRRL---AGMLEEWLYVLTMNAGGKD-----NRWEVMDCLGQ 115

  Fly   395 AWAPLNAMATP-RHGLGVAVLEGPLYAVGGHDGWSYLN-------TVERWDPIARTWSYVAPMSS 451
            ..:.|..|..| :.|..|.|::|.|..:.   |...:|       .|.::|....:||.:|.:..
plant   116 KLSSLPPMPGPAKTGFKVVVVDGKLLVIA---GCCMINGSLVASADVYQYDTCLNSWSRLADLEV 177

  Fly   452 MRSTAGVAVLGGRLYAVGGR--DGSVCHRSIECYDPHTNKWSLLAPMNRRRGGVGVTVANGFLYA 514
            .|.....|.:.|.:|.|||.  ||... .|.|.|||.|..|:.:..:.|.|.|...:..||.||.
plant   178 ARYDFACAEVNGHVYVVGGHGVDGESL-SSAEVYDPETCTWTFIESLRRPRWGCFASAFNGKLYV 241

  Fly   515 LGGHDCPASNPMVCRTETVERYDPATDTW-------TLICS-LALGR------------------ 553
            :||.    ||..:..::.::.|:....:|       |::.: :.:|:                  
plant   242 MGGR----SNFTIGNSKLLDVYNTQCGSWHGSKNGLTMVTAHVEVGKKLFCIDWKNHRKMSVFNA 302

  Fly   554 -----DAIGCALLGDRL--IVVGGYDGNHALKSVEE--------YDPVRNGWNELAPMAFARAGA 603
                 :.:...|.|...  ...|...|...|.|.:|        |||..:...:........:|:
plant   303 EDETWEVVALPLSGSSRAGFQFGKLSGKLLLFSSQEETGQCTLLYDPDASPGTQWKTSEIKLSGS 367

  Fly   604 CVVAI 608
            ||.::
plant   368 CVCSV 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 PHA03098 71..591 CDD:222983 74/311 (24%)
KELCH repeat 359..402 CDD:276965 12/46 (26%)
KELCH repeat 406..449 CDD:276965 12/49 (24%)
KELCH repeat 453..497 CDD:276965 16/45 (36%)
KELCH repeat 500..549 CDD:276965 13/56 (23%)
KELCH repeat 553..596 CDD:276965 10/75 (13%)
AT1G67480NP_176915.1 F-box_AtAFR-like 39..83 CDD:438923 6/23 (26%)
NanM 93..341 CDD:442289 60/260 (23%)
KELCH repeat 130..175 CDD:276965 12/47 (26%)
KELCH repeat 179..224 CDD:276965 16/45 (36%)
KELCH repeat 227..267 CDD:276965 11/43 (26%)

Return to query results.
Submit another query.