DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT1G67480

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001077785.1 Gene:AT1G67480 / 843069 AraportID:AT1G67480 Length:376 Species:Arabidopsis thaliana


Alignment Length:330 Identity:77/330 - (23%)
Similarity:127/330 - (38%) Gaps:78/330 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   338 SIESYCPRLDKW----TPWKHMTGRRLQFGAAVMEDKLILV----GGRDGLKTLNTVESLDLNTM 394
            |:.|.|   .||    ...:.:|.|||   |.::|:.|.::    ||:|     |..|.:|....
plant    62 SMGSVC---KKWRFVVQSKEFITVRRL---AGMLEEWLYVLTMNAGGKD-----NRWEVMDCLGQ 115

  Fly   395 AWAPLNAMATP-RHGLGVAVLEGPLYAVGGHDGWSYLN-------TVERWDPIARTWSYVAPMSS 451
            ..:.|..|..| :.|..|.|::|.|..:.   |...:|       .|.::|....:||.:|.:..
plant   116 KLSSLPPMPGPAKTGFKVVVVDGKLLVIA---GCCMINGSLVASADVYQYDTCLNSWSRLADLEV 177

  Fly   452 MRSTAGVAVLGGRLYAVGGR--DGSVCHRSIECYDPHTNKWSLLAPMNRRRGGVGVTVANGFLYA 514
            .|.....|.:.|.:|.|||.  ||... .|.|.|||.|..|:.:..:.|.|.|...:..||.||.
plant   178 ARYDFACAEVNGHVYVVGGHGVDGESL-SSAEVYDPETCTWTFIESLRRPRWGCFASAFNGKLYV 241

  Fly   515 LGGHDCPASNPMVCRTETVERYDPATDTW-------TLICS-LALGR------------------ 553
            :||.    ||..:..::.::.|:....:|       |::.: :.:|:                  
plant   242 MGGR----SNFTIGNSKLLDVYNTQCGSWHGSKNGLTMVTAHVEVGKKLFCIDWKNHRKMSVFNA 302

  Fly   554 -----DAIGCALLGDRL--IVVGGYDGNHALKSVEE--------YDPVRNGWNELAPMAFARAGA 603
                 :.:...|.|...  ...|...|...|.|.:|        |||..:...:........:|:
plant   303 EDETWEVVALPLSGSSRAGFQFGKLSGKLLLFSSQEETGQCTLLYDPDASPGTQWKTSEIKLSGS 367

  Fly   604 CVVAI 608
            ||.::
plant   368 CVCSV 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 74/311 (24%)
BACK 179..281 CDD:285009
Kelch 323..369 CDD:128874 10/34 (29%)
KELCH repeat 359..402 CDD:276965 12/46 (26%)
Kelch 370..416 CDD:128874 13/50 (26%)
KELCH repeat 406..449 CDD:276965 12/49 (24%)
Kelch 418..463 CDD:128874 10/51 (20%)
KELCH repeat 453..497 CDD:276965 16/45 (36%)
Kelch 464..510 CDD:128874 16/47 (34%)
Kelch_1 499..546 CDD:279660 13/53 (25%)
KELCH repeat 500..549 CDD:276965 13/56 (23%)
KELCH repeat 553..596 CDD:276965 10/75 (13%)
Kelch 564..610 CDD:128874 11/55 (20%)
AT1G67480NP_001077785.1 F-box 38..79 CDD:279040 5/19 (26%)
Kelch_1 129..175 CDD:279660 12/48 (25%)
KELCH repeat 130..175 CDD:276965 12/47 (26%)
Kelch_1 178..224 CDD:279660 16/46 (35%)
KELCH repeat 179..224 CDD:276965 16/45 (36%)
KELCH repeat 227..267 CDD:276965 11/43 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I2576
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.960

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