DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT1G30090

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_564347.1 Gene:AT1G30090 / 839888 AraportID:AT1G30090 Length:398 Species:Arabidopsis thaliana


Alignment Length:354 Identity:86/354 - (24%)
Similarity:126/354 - (35%) Gaps:107/354 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 LLALVRLPLLQPAFIMDHV--ENVCNANECQQLVMEAFKWHLMPERRSRIATERT-TPRKSTVG- 322
            |..|:|:|      :..||  ::||.            :|||:      ..|:.| ..::...| 
plant    63 LNCLLRVP------VQSHVSSKSVCK------------RWHLL------FGTKETFFAKRKEFGF 103

  Fly   323 --RLLAVGGMDAHKGAISIESYCPRLDKWTPWKHMTGRRL---QFGAAVMEDK------------ 370
              ..|.|.|.....|.|.             ||.:..|.|   :..|....||            
plant   104 KDPWLFVVGFSRCTGKIQ-------------WKVLDLRNLTWHEIPAMPCRDKVCPHGFRSVSMP 155

  Fly   371 ----LILVGG--RDGLKTLNTVESLDLNTMAWAPLNAMATPRHGLGVAVLEGPLYAVGGHDGWSY 429
                :.:.||  .|....|:.|...|:....|...|.|.|.|......|::|.:||.||:....|
plant   156 REGTMFVCGGMVSDSDCPLDLVLKYDMVKNHWTVTNKMITARSFFASGVIDGMIYAAGGNAADLY 220

  Fly   430 -LNTVERWDPIARTWSYVAPMSSMRSTAGVAVLGGRLYAVGG--------RDGSVCHRSIECYDP 485
             |:..|..:|:...|..|:.|.:..::...|||.|:|....|        ..|.|       |||
plant   221 ELDCAEVLNPLDGNWRPVSNMVAHMASYDTAVLNGKLLVTEGWLWPFFVSPRGQV-------YDP 278

  Fly   486 HTNKWSLLAPMNRRRGGVGVTVANGFLYALGGHDCPASNPMVCRTETVER-----YDPATDTWTL 545
            .|::|..:: |..|.|..|.:|.   :|           ..:.....:||     |||.||:|..
plant   279 RTDQWETMS-MGLREGWTGTSVV---IY-----------DRLFIVSELERMKMKVYDPVTDSWET 328

  Fly   546 ICSLALGRD-----AIGCALLGDRLIVVG 569
            |....|...     |:.|  .|:|:.|||
plant   329 INGPELPEQICRPFAVNC--YGNRVYVVG 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 86/354 (24%)
BACK 179..281 CDD:285009 6/20 (30%)
Kelch 323..369 CDD:128874 10/48 (21%)
KELCH repeat 359..402 CDD:276965 12/63 (19%)
Kelch 370..416 CDD:128874 13/63 (21%)
KELCH repeat 406..449 CDD:276965 13/43 (30%)
Kelch 418..463 CDD:128874 14/45 (31%)
KELCH repeat 453..497 CDD:276965 13/51 (25%)
Kelch 464..510 CDD:128874 14/53 (26%)
Kelch_1 499..546 CDD:279660 13/51 (25%)
KELCH repeat 500..549 CDD:276965 13/53 (25%)
KELCH repeat 553..596 CDD:276965 7/22 (32%)
Kelch 564..610 CDD:128874 4/6 (67%)
AT1G30090NP_564347.1 F-box 52..95 CDD:279040 13/55 (24%)
KELCH repeat 147..193 CDD:276965 8/45 (18%)
Kelch 161..207 CDD:128874 12/45 (27%)
Kelch_1 196..241 CDD:279660 13/44 (30%)
KELCH repeat 197..242 CDD:276965 13/44 (30%)
KELCH repeat 245..287 CDD:276965 13/48 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I2576
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.960

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