DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT1G27420

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_174062.1 Gene:AT1G27420 / 839632 AraportID:AT1G27420 Length:346 Species:Arabidopsis thaliana


Alignment Length:282 Identity:67/282 - (23%)
Similarity:102/282 - (36%) Gaps:94/282 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   353 KHMTGRRLQFGAAVMEDKLILVGGRDGLKTLNTVESLDLNTMAWAPLNAMATP-----------R 406
            :.:||...:|...:||.:.    |||               :.|...:|....           :
plant    54 RKLTGTVEEFLCVLMESEC----GRD---------------VYWEVFDASGNKLGQIPPVPGPLK 99

  Fly   407 HGLGVAVLE-GPLYAVGGH---DGWSYLNT--------VERWDPIARTWSYVAPMSSMRSTAGVA 459
            .|.|||||: |.:...||:   :| |.:|:        |..:||...:|..:|.|:..|.....|
plant   100 RGFGVAVLDGGKIVFFGGYTEVEG-SGINSTTVSASADVYEFDPANNSWRKLAGMNIPRYNFAFA 163

  Fly   460 VLGGRLYAVGGRDGSVCHRS-IECYDPHTNKWSLLAPMNRRRGGVGVTVANGF-------LYALG 516
            .:.|.||.:.|........| .|.|:|.||:|||:...||       .|..||       |||:|
plant   164 EVNGLLYVIRGYSTDTYSLSNAEVYNPKTNQWSLMHCPNR-------PVWRGFAFAFSSKLYAVG 221

  Fly   517 GHDCPASNPMVCRTETVERYDPATDTWTLICSLALGRDAIGCALLGDRLIVVGGY---------- 571
            .           .:..::.|||.|.||.              .|..::.:.|..|          
plant   222 N-----------GSRFIDIYDPKTQTWE--------------ELNSEQSVSVYSYTVVRNKVYFM 261

  Fly   572 DGNHALKSVEEYDPVRNGWNEL 593
            |.|...: :..:||..|.|:.:
plant   262 DRNMPGR-LGVFDPEENSWSSV 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 66/278 (24%)
BACK 179..281 CDD:285009
Kelch 323..369 CDD:128874 4/15 (27%)
KELCH repeat 359..402 CDD:276965 7/42 (17%)
Kelch 370..416 CDD:128874 11/57 (19%)
KELCH repeat 406..449 CDD:276965 17/54 (31%)
Kelch 418..463 CDD:128874 13/55 (24%)
KELCH repeat 453..497 CDD:276965 15/44 (34%)
Kelch 464..510 CDD:128874 15/46 (33%)
Kelch_1 499..546 CDD:279660 13/53 (25%)
KELCH repeat 500..549 CDD:276965 13/55 (24%)
KELCH repeat 553..596 CDD:276965 9/51 (18%)
Kelch 564..610 CDD:128874 8/40 (20%)
AT1G27420NP_174062.1 F-box 9..50 CDD:395521
PHA03098 <81..286 CDD:222983 58/236 (25%)
KELCH repeat 100..153 CDD:276965 17/53 (32%)
KELCH repeat 157..202 CDD:276965 15/44 (34%)
KELCH repeat 205..242 CDD:276965 14/61 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I2576
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.960

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