DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT1G19460

DIOPT Version :10

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_173378.1 Gene:AT1G19460 / 838530 AraportID:AT1G19460 Length:416 Species:Arabidopsis thaliana


Alignment Length:372 Identity:71/372 - (19%)
Similarity:127/372 - (34%) Gaps:106/372 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 QSCTTLLRLAQ----AYTCQYFMQVCQNQEFFQ------LNADQLGKLLSSDDLNVPSEQDVFHS 243
            ::|..|:|...    :....||..:..:.|.::      |:...|...:...|.|.|        
plant    64 EACVALIRKCDYPSLSSVSSYFFNLIASSELYETRSRLGLSETFLYAAIRFPDTNPP-------- 120

  Fly   244 LMSW-VRHDSAAREQHIPELLALVRLP-------LLQPAFIMDHVENV----------CNANECQ 290
              :| :.|.:......:.:|.:|..:|       :.|..:::..:.:|          |..::|:
plant   121 --NWYILHRNKVSSLRLSKLESLPPVPYGCSVVTIGQEMYVIGGLLDVRRLQLMTLIDCRTHKCR 183

  Fly   291 QL-VMEAFKWHLMPERRSRIATERTTPRKSTV--GRLLAVGGMDAHK-GAISIESYCPRLDKWT- 350
            .| .|:..::|                ..:.|  |::..:||....| .|..||.:..:...|. 
plant   184 SLPKMKRGRYH----------------AAAGVFDGKIYVIGGFRMRKPDAEWIEVFDLKKQIWES 232

  Fly   351 ---PWKHMTGRRLQFGAAVMEDKLILVGGR------------DGLKTLNTVESLDLNTMAWAPLN 400
               |:...:.....|..|||||||.::|.|            |.....|.:.:|      |....
plant   233 LPGPYPKTSMDSQFFAHAVMEDKLYILGSRCLIYEPKRNGEWDATVNANPIWNL------WKVPC 291

  Fly   401 AMATPRHGLGVAVLEGPLYAVG-----GHDGWSYLNTVERWDPIARTWSYVAPMSSMRSTAGVAV 460
            .|.        .|::..||.:.     ||....|....:.|.|:........|...:...:.:|.
plant   292 TMQ--------CVIDDMLYTIDPQCTLGHPIVVYNPKDKTWRPVKGESLRTLPSYFVSDGSEMAN 348

  Fly   461 LGGRLYAVGGRDGSVCHRSIECYDP-----HTNKWSLLAPMNRRRGG 502
            .||:|..:|. :||       |||.     ....|.::..:.:|.||
plant   349 FGGKLVILGS-NGS-------CYDTGDCIGEKGIWCVMIELEKREGG 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 PHA03098 71..591 CDD:222983 71/372 (19%)
KELCH repeat 359..402 CDD:276965 14/54 (26%)
KELCH repeat 406..449 CDD:276965 8/47 (17%)
KELCH repeat 453..497 CDD:276965 11/48 (23%)
KELCH repeat 500..549 CDD:276965 2/3 (67%)
KELCH repeat 553..596 CDD:276965
AT1G19460NP_173378.1 F-box_SF 57..98 CDD:459239 6/33 (18%)
NanM 136..357 CDD:442289 48/250 (19%)
KELCH repeat 146..188 CDD:276965 5/41 (12%)
KELCH repeat 192..243 CDD:276965 11/66 (17%)
Blue background indicates that the domain is not in the aligned region.

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