DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT5G60570

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001331512.1 Gene:AT5G60570 / 836178 AraportID:AT5G60570 Length:393 Species:Arabidopsis thaliana


Alignment Length:251 Identity:62/251 - (24%)
Similarity:91/251 - (36%) Gaps:44/251 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   369 DKLILVGGRDGLKTLNTVESLDLNTMAWAPLNAMATPRHGLGVAVLEGPLYAVGGHD-GWSYLNT 432
            |..:||.||:..:.  .:....|.:..|.....|..||.......|.|.....||.| ..:.|.:
plant   145 DDELLVFGRELFQF--AIWKYSLRSRCWVKCEGMHRPRCLFASGSLGGIAIVAGGTDMNGNILAS 207

  Fly   433 VERWDPIARTWSYVAPMSSMRSTAGVAVLGGRLYAVGGRDG-SVCHRSIECYDPHTNKWSLLAPM 496
            .|.:|..:..|..:..|.|.|.......:.|:.|.:||... :|.....|.:|..|.||..:..|
plant   208 AELYDSSSGRWEMLPNMHSPRRLCSGFFMDGKFYVIGGMSSPNVSVTFGEEFDLETRKWRKIEGM 272

  Fly   497 --NRRRGGVG---VTVANGFLYALGGHDCPASNPMVCRTETVERYDPATDTWTLICSLALGR--- 553
              |..|....   |.|.|..|:.|           ...|..|::||...:.|.:     :||   
plant   273 YPNVNRAAQAPPLVVVVNNELFTL-----------EYSTNMVKKYDKVKNKWEV-----MGRLPP 321

  Fly   554 -----DAIGCAL--LGDRLIVVGGYDGNHALKSVEEYDPVRNGWNELAPMAFARAG 602
                 :..|.|.  .||:|:|..|..|.|. :.:     |.|.|   .|.:.|:.|
plant   322 MVDSSNGWGLAFKPCGDQLLVFCGQRGPHG-EGI-----VVNSW---CPKSGAKDG 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 58/238 (24%)
BACK 179..281 CDD:285009
Kelch 323..369 CDD:128874 62/251 (25%)
KELCH repeat 359..402 CDD:276965 7/32 (22%)
Kelch 370..416 CDD:128874 10/45 (22%)
KELCH repeat 406..449 CDD:276965 10/43 (23%)
Kelch 418..463 CDD:128874 10/45 (22%)
KELCH repeat 453..497 CDD:276965 12/46 (26%)
Kelch 464..510 CDD:128874 14/51 (27%)
Kelch_1 499..546 CDD:279660 11/49 (22%)
KELCH repeat 500..549 CDD:276965 11/51 (22%)
KELCH repeat 553..596 CDD:276965 13/52 (25%)
Kelch 564..610 CDD:128874 11/39 (28%)
AT5G60570NP_001331512.1 F-box 50..93 CDD:366220
PHA03098 <120..325 CDD:222983 47/197 (24%)
KELCH repeat 180..225 CDD:276965 10/44 (23%)
KELCH repeat 228..272 CDD:276965 11/43 (26%)
KELCH repeat 278..320 CDD:276965 13/57 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I2576
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.960

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