DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT5G38670

DIOPT Version :10

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_198683.1 Gene:AT5G38670 / 833857 AraportID:AT5G38670 Length:291 Species:Arabidopsis thaliana


Alignment Length:323 Identity:66/323 - (20%)
Similarity:109/323 - (33%) Gaps:105/323 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 LVMEAFKWHLMPERRSRIATERTTPRKSTVGRLLAVGGMDAHKGAISIESYCPRLDKWTPWKHMT 356
            ||.::|        ||.||:......:|.         :|..:..:.| .||.. :.|.....:.
plant    33 LVSKSF--------RSLIASPELYKTRSL---------LDRTESCLYI-LYCTS-NTWHEGPRLR 78

  Fly   357 GRRLQFGAAVMEDKLILVGGR--DGLKTLNTVESLDLNTMAWAPLNAMATPRHGLGVAVLEGPLY 419
            .:.:...|.|:::| |.|.||  ||  ...|.:..|.||..|.||:...:...            
plant    79 VKLMSCTACVLDEK-IYVSGRCKDG--DSMTFQVFDTNTQTWDPLSVPCSETK------------ 128

  Fly   420 AVGGHDGWSYLNTVERWDPIARTWSYVAPMSSMRSTAGVAVLGGRLYAVGGRDGSVCHRSIECYD 484
                ||   :...:.|:|                         |:|:.|.       ::.::.|:
plant   129 ----HD---FHYKIVRFD-------------------------GKLHLVS-------YKGVDAYN 154

  Fly   485 PHTNKWSLLAPMNRRRGGVGVTVANGFLYALGGHDCPASNPMVCRTETVERYDPATDTWTLICSL 549
            ....:|.|:.|....         |.:||     ||..:...|  ..|:.:.|.:|..|......
plant   155 SKEGRWDLVTPSIEH---------NKYLY-----DCYRNIGNV--WYTIVKGDISTSVWWYHSEE 203

  Fly   550 ALGRDAIGCALLG------DRLIVVGGYDGNHALKSVEEYDPVRNG---WNELAPMAFARAGA 603
            ...||..|  ::|      |..:.:..|.|..|: ..::|.|.|..   |  .|.:|..|.|:
plant   204 REWRDLKG--MVGLPKFPIDACLRMVDYGGKMAV-LWDDYLPGRRKKMIW--CAEIALERRGS 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 PHA03098 71..591 CDD:222983 61/309 (20%)
KELCH repeat 359..402 CDD:276965 16/44 (36%)
KELCH repeat 406..449 CDD:276965 4/42 (10%)
KELCH repeat 453..497 CDD:276965 7/43 (16%)
KELCH repeat 500..549 CDD:276965 10/48 (21%)
KELCH repeat 553..596 CDD:276965 13/51 (25%)
AT5G38670NP_198683.1 F-box_AtAFR-like 9..51 CDD:438923 7/25 (28%)
NanM <68..254 CDD:442289 51/261 (20%)
KELCH repeat 81..121 CDD:276965 15/42 (36%)
KELCH repeat 124..165 CDD:276965 10/91 (11%)

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