DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT5G28180

DIOPT Version :10

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_198170.1 Gene:AT5G28180 / 832894 AraportID:AT5G28180 Length:352 Species:Arabidopsis thaliana


Alignment Length:194 Identity:49/194 - (25%)
Similarity:74/194 - (38%) Gaps:22/194 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   365 AVMEDKLILVGGR-DGLKTLNTVES----LDLNTMAWAPLNAMATPR-HGLGVAVLEGPLYAVGG 423
            :::...||.||.. .||...|...|    .:...:.|.....|...| ..:|.| ..|.||.:||
plant   140 SIVPHYLISVGSEVYGLSQHNDPSSNMFVRNKEDLFWCNAPNMTVARAKAIGHA-YNGKLYVMGG 203

  Fly   424 HDGWSYLNTVERWDPIARTWSYVA-PMSSMR--STAGVAVLGGRLYAVGGRDGSVCHRSIECYDP 485
            ......:|..|.:||..:||..:. |.|.:|  |...:.|...:||.      |...:....|||
plant   204 CRDDESVNWGEVFDPKTQTWEALPDPGSELRFSSIRKIDVFQEKLYV------SSNEKIDSVYDP 262

  Fly   486 HTNKWSLL--APMNRRRGGVG-VTVAN--GFLYALGGH-DCPASNPMVCRTETVERYDPATDTW 543
            ...||::.  :|:.....|.| :.:||  |.|..|... .......:.|....:|:.|...:.|
plant   263 KEGKWNVAEKSPVQCMNLGCGMIEIANYGGKLLILWDKVGLSQDKDIWCAVIALEKRDGVDEVW 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 PHA03098 71..591 CDD:222983 49/194 (25%)
KELCH repeat 359..402 CDD:276965 9/41 (22%)
KELCH repeat 406..449 CDD:276965 14/44 (32%)
KELCH repeat 453..497 CDD:276965 12/47 (26%)
KELCH repeat 500..549 CDD:276965 11/48 (23%)
KELCH repeat 553..596 CDD:276965
AT5G28180NP_198170.1 F-box_AtAFR-like 37..76 CDD:438923
NanM 176..>297 CDD:442289 36/127 (28%)
KELCH repeat 186..231 CDD:276965 15/45 (33%)
Blue background indicates that the domain is not in the aligned region.

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