DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT5G28180

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_198170.1 Gene:AT5G28180 / 832894 AraportID:AT5G28180 Length:352 Species:Arabidopsis thaliana


Alignment Length:194 Identity:49/194 - (25%)
Similarity:74/194 - (38%) Gaps:22/194 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   365 AVMEDKLILVGGR-DGLKTLNTVES----LDLNTMAWAPLNAMATPR-HGLGVAVLEGPLYAVGG 423
            :::...||.||.. .||...|...|    .:...:.|.....|...| ..:|.| ..|.||.:||
plant   140 SIVPHYLISVGSEVYGLSQHNDPSSNMFVRNKEDLFWCNAPNMTVARAKAIGHA-YNGKLYVMGG 203

  Fly   424 HDGWSYLNTVERWDPIARTWSYVA-PMSSMR--STAGVAVLGGRLYAVGGRDGSVCHRSIECYDP 485
            ......:|..|.:||..:||..:. |.|.:|  |...:.|...:||.      |...:....|||
plant   204 CRDDESVNWGEVFDPKTQTWEALPDPGSELRFSSIRKIDVFQEKLYV------SSNEKIDSVYDP 262

  Fly   486 HTNKWSLL--APMNRRRGGVG-VTVAN--GFLYALGGH-DCPASNPMVCRTETVERYDPATDTW 543
            ...||::.  :|:.....|.| :.:||  |.|..|... .......:.|....:|:.|...:.|
plant   263 KEGKWNVAEKSPVQCMNLGCGMIEIANYGGKLLILWDKVGLSQDKDIWCAVIALEKRDGVDEVW 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 49/194 (25%)
BACK 179..281 CDD:285009
Kelch 323..369 CDD:128874 0/3 (0%)
KELCH repeat 359..402 CDD:276965 9/41 (22%)
Kelch 370..416 CDD:128874 13/51 (25%)
KELCH repeat 406..449 CDD:276965 14/44 (32%)
Kelch 418..463 CDD:128874 15/47 (32%)
KELCH repeat 453..497 CDD:276965 12/47 (26%)
Kelch 464..510 CDD:128874 13/50 (26%)
Kelch_1 499..546 CDD:279660 11/49 (22%)
KELCH repeat 500..549 CDD:276965 11/48 (23%)
KELCH repeat 553..596 CDD:276965
Kelch 564..610 CDD:128874
AT5G28180NP_198170.1 F-box 36..78 CDD:279040
KELCH repeat 186..231 CDD:276965 15/45 (33%)
Kelch_1 192..230 CDD:279660 12/38 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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