DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT5G28160

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_198168.1 Gene:AT5G28160 / 832891 AraportID:AT5G28160 Length:324 Species:Arabidopsis thaliana


Alignment Length:166 Identity:41/166 - (24%)
Similarity:68/166 - (40%) Gaps:39/166 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   447 AP-MSSMRSTAGVAVLGGRLYAVGGRDGSVCHRSI---ECYDPHTNKWSLL---APMNRRRGGVG 504
            || |:..|:.|...|..|::|.:|   |.:...|:   |.:|..|..|..|   .|..|......
plant   152 APNMTVARAKASAVVFNGKIYVMG---GCMADESVNWGEVFDIKTQTWEALPDPGPEFRFSSIRK 213

  Fly   505 VTVANGFLYALGGHDCPASNPMVCRTETVERYDPATDTWTLICSLALGRDAIGCALL------GD 563
            :.|....||.       .||.   :.::|  ||| .:.|.::..|.:....:||..:      |.
plant   214 IDVFQEKLYV-------RSNE---KKDSV--YDP-KEEWRVVKGLDMLNRNLGCGTIEIVHYGGK 265

  Fly   564 RLIVVGGYDGNH------ALKSVEEYDPVRNGWNEL 593
            .||:....|.:|      |:.::|:    |:|.:|:
plant   266 LLILWDKVDLSHDKDIWCAVIALEK----RHGSDEV 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 40/162 (25%)
BACK 179..281 CDD:285009
Kelch 323..369 CDD:128874
KELCH repeat 359..402 CDD:276965
Kelch 370..416 CDD:128874
KELCH repeat 406..449 CDD:276965 2/2 (100%)
Kelch 418..463 CDD:128874 6/16 (38%)
KELCH repeat 453..497 CDD:276965 14/49 (29%)
Kelch 464..510 CDD:128874 12/51 (24%)
Kelch_1 499..546 CDD:279660 10/46 (22%)
KELCH repeat 500..549 CDD:276965 10/48 (21%)
KELCH repeat 553..596 CDD:276965 12/53 (23%)
Kelch 564..610 CDD:128874 9/36 (25%)
AT5G28160NP_198168.1 F-box 8..55 CDD:279040
Kelch_1 158..203 CDD:279660 13/47 (28%)
KELCH repeat 159..202 CDD:276965 13/45 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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