DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT5G02980

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_195918.1 Gene:AT5G02980 / 831482 AraportID:AT5G02980 Length:335 Species:Arabidopsis thaliana


Alignment Length:149 Identity:33/149 - (22%)
Similarity:56/149 - (37%) Gaps:41/149 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   418 LYA----VGGHDGWSYL-------NTVERW---DPIAR--------TWSYVAPMSSMRST-AGVA 459
            |||    :|..:.:.|:       |...||   .|:..        .::|....|::.|| :.:.
plant    53 LYATRSRIGKTERFLYICLNLTKSNPKYRWFTLPPVPNEQKLLPVPLFTYHLNSSTVSSTDSEIY 117

  Fly   460 VLGGRLYAVGGRDGSVCHRSIECYDPHTNKWSLLAPMNRRRGGVGVTVANGFLYALGGHDCPASN 524
            ::||.::....:..|:    .:|....|.:   |..|...|......|.:|.:|.:||.:...  
plant   118 IIGGLVWGNRSKKASI----FDCRSHQTRR---LPKMRFPRASAAAHVIDGKIYVIGGGEIRG-- 173

  Fly   525 PMVCRTETVERYDPATDTW 543
                     |.|||.|.||
plant   174 ---------EVYDPTTQTW 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 33/149 (22%)
BACK 179..281 CDD:285009
Kelch 323..369 CDD:128874
KELCH repeat 359..402 CDD:276965
Kelch 370..416 CDD:128874
KELCH repeat 406..449 CDD:276965 10/52 (19%)
Kelch 418..463 CDD:128874 13/67 (19%)
KELCH repeat 453..497 CDD:276965 8/44 (18%)
Kelch 464..510 CDD:128874 7/45 (16%)
Kelch_1 499..546 CDD:279660 13/45 (29%)
KELCH repeat 500..549 CDD:276965 13/44 (30%)
KELCH repeat 553..596 CDD:276965
Kelch 564..610 CDD:128874
AT5G02980NP_195918.1 F-box 13..59 CDD:279040 3/5 (60%)
KELCH repeat 99..148 CDD:276965 10/55 (18%)
Kelch 116..161 CDD:128874 9/51 (18%)
Kelch_1 150..183 CDD:279660 11/43 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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