DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT4G39760

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_195686.1 Gene:AT4G39760 / 830134 AraportID:AT4G39760 Length:369 Species:Arabidopsis thaliana


Alignment Length:239 Identity:46/239 - (19%)
Similarity:67/239 - (28%) Gaps:85/239 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   302 MPERRSRIATERTTPRKSTVGRLLAVGGMDAHKGAISIESYCPRL---DKWTPWKHMTGRRLQFG 363
            :|:..:...:..:.|.:..|..|..|.|           ||.|:|   .|            ||.
plant     7 VPQSTNHSLSFSSLPHEIVVSCLARVSG-----------SYYPKLCLVSK------------QFR 48

  Fly   364 AAVMEDKLILVGGRDGLKTLNTVESLDLNTMA-------WAPLNAMATPRHGLGVAVLEGPL--- 418
            :.::.:::.......|.|.......|.|.|.:       |...|...|.         :||:   
plant    49 SIILSNEIYKARSHLGTKENRLFVWLKLPTRSYPSWFALWIKPNETLTN---------DGPIKKQ 104

  Fly   419 ----------------------------YAVGGHDG------WSYLNTVERWDPIARTWSYVAPM 449
                                        |.|||:|.      |.|.|..      ..|.|....|
plant   105 STGNLLVPLPCSYNYQVLVPSVIVGSETYIVGGYDDALSSSVWFYKNGK------IHTLSKSPSM 163

  Fly   450 SSMRSTAGVAVLGGRLYAVGGRDGSVCHRSIECYDPHTNKWSLL 493
            |..|..|.|......:|.:||.|........|.::..|..|..|
plant   164 SVARIDAVVVGQYPNIYVMGGCDSDESMNWGEVFNIKTQTWEPL 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 46/239 (19%)
BACK 179..281 CDD:285009
Kelch 323..369 CDD:128874 10/48 (21%)
KELCH repeat 359..402 CDD:276965 9/49 (18%)
Kelch 370..416 CDD:128874 8/52 (15%)
KELCH repeat 406..449 CDD:276965 12/79 (15%)
Kelch 418..463 CDD:128874 15/81 (19%)
KELCH repeat 453..497 CDD:276965 11/41 (27%)
Kelch 464..510 CDD:128874 8/30 (27%)
Kelch_1 499..546 CDD:279660
KELCH repeat 500..549 CDD:276965
KELCH repeat 553..596 CDD:276965
Kelch 564..610 CDD:128874
AT4G39760NP_195686.1 F-box 16..62 CDD:279040 12/68 (18%)
KELCH repeat 167..212 CDD:276965 11/41 (27%)
Kelch_1 170..211 CDD:279660 10/38 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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