DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT4G39753

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_568070.1 Gene:AT4G39753 / 830132 AraportID:AT4G39753 Length:390 Species:Arabidopsis thaliana


Alignment Length:288 Identity:62/288 - (21%)
Similarity:95/288 - (32%) Gaps:103/288 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 ERTTPRKSTVGRL---------LAVGGMDAHKGAISIESYCP------RLDKWTPWKH---MTGR 358
            |:...:|||:.::         |.|.|:|:...|.. :.|.|      |..:...|::   ||..
plant   118 EKKKKKKSTLVQVPSSYASQTPLLVVGIDSDVYAFK-QCYPPSRVMFVRNKECVIWRNAPDMTVA 181

  Fly   359 RLQFGAAVMEDKLILVGGRDGLKTLNTVESLDLNTMAWAPLNAMATPRHGLGVAVLEGPLYAVGG 423
            |....|.|.:.|:.::||....::.|..|..|..|..|.||                        
plant   182 RANPVAYVFDRKIYVMGGCAETESANWGEVFDPKTQTWEPL------------------------ 222

  Fly   424 HDGWSYLNTVERWDPIARTWSYVAPMSSMRSTA---GVAVLGGRLYAVGGRDG--SVCHRSIECY 483
                          |:        |...:|.::   .:.::.|:.| |...|.  ||       |
plant   223 --------------PV--------PSPELRFSSMIRKIEMIQGKFY-VRSNDSKDSV-------Y 257

  Fly   484 DPHTNKWSLLA--PMNRRRGGVGVTVANGFLYALGGHDCPASNPMVCRTETVERYDPATDTWTLI 546
            ||...||::.|  .:|..|..||     ...|:             ||..:...:|.....|.||
plant   258 DPIREKWNVAAKPQLNDSRCSVG-----NVWYS-------------CRPNSFLWFDNEIKNWRLI 304

  Fly   547 CSLALGRDAIGCALLGDRLIVVGGYDGN 574
            ..|:....:  |.   ..||....||||
plant   305 KGLSSLNHS--CR---SGLIETVCYDGN 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 62/288 (22%)
BACK 179..281 CDD:285009
Kelch 323..369 CDD:128874 14/63 (22%)
KELCH repeat 359..402 CDD:276965 13/42 (31%)
Kelch 370..416 CDD:128874 10/45 (22%)
KELCH repeat 406..449 CDD:276965 1/42 (2%)
Kelch 418..463 CDD:128874 3/47 (6%)
KELCH repeat 453..497 CDD:276965 13/50 (26%)
Kelch 464..510 CDD:128874 15/49 (31%)
Kelch_1 499..546 CDD:279660 8/46 (17%)
KELCH repeat 500..549 CDD:276965 10/48 (21%)
KELCH repeat 553..596 CDD:276965 7/22 (32%)
Kelch 564..610 CDD:128874 6/11 (55%)
AT4G39753NP_568070.1 F-box 40..80 CDD:366220
PHA03098 <171..284 CDD:222983 35/171 (20%)
Kelch_1 181..223 CDD:366584 13/79 (16%)
KELCH repeat 182..227 CDD:276965 15/90 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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