DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17754 and AT4G39590

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_568062.1 Gene:AT4G39590 / 830113 AraportID:AT4G39590 Length:402 Species:Arabidopsis thaliana


Alignment Length:274 Identity:59/274 - (21%)
Similarity:90/274 - (32%) Gaps:84/274 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 QFGAAVMEDKLILVGGRDGLKTLNTVESLDLNTMAWAPLNAMATPRHGLGVAVLEGPLYAVGGHD 425
            :.|..|.:|...|...|:   ..:.|..||..:..|.....|...|.....:|::|.:|..||.:
plant   146 RIGGTVGDDSCPLGFDRE---PSSKVSILDCRSHTWRDGPRMRLNRRSSTTSVVDGKIYVTGGTE 207

  Fly   426 G------WSYLNTVERWDP------------IARTWSYVAPMSSMRSTA--GVAVLGGRLYAVGG 470
            .      |     :|.:||            |.:.|..|....:::|..  |...|.|..|.|  
plant   208 DTDNPSHW-----IEVFDPKTQSWGTVTNPHIVKVWEEVCYRRAVKSIGHDGKLYLSGDKYVV-- 265

  Fly   471 RDGSVCHRSIECYDPHTNKWSLLAPMNRRRGGVGVTVANGFL--YALGGHDCPASNPMVCRTETV 533
                        |||...||:              :|...:|  ||:|..:|...|.:....:.|
plant   266 ------------YDPDEGKWN--------------SVEEHWLIGYAIGSSNCVVDNILFYWDQGV 304

  Fly   534 ER-YDPATDTWTLICSLALGRDAIG----CAL--LGDRLIVV------GGY-------------D 572
            .: ||....:|..:..|....|...    |.|  ||.::.|:      .|.             |
plant   305 FKWYDSKVSSWKQLKGLEGLPDDFSQREYCKLVDLGGKMAVLWDKWEYSGVCMIFCAEISLEKRD 369

  Fly   573 GNHALKSVEEYDPV 586
            |:.....||.:|.|
plant   370 GDEIWGKVEWFDTV 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 59/274 (22%)
BACK 179..281 CDD:285009
Kelch 323..369 CDD:128874 2/7 (29%)
KELCH repeat 359..402 CDD:276965 9/40 (23%)
Kelch 370..416 CDD:128874 9/45 (20%)
KELCH repeat 406..449 CDD:276965 13/60 (22%)
Kelch 418..463 CDD:128874 13/64 (20%)
KELCH repeat 453..497 CDD:276965 11/45 (24%)
Kelch 464..510 CDD:128874 8/45 (18%)
Kelch_1 499..546 CDD:279660 11/49 (22%)
KELCH repeat 500..549 CDD:276965 11/51 (22%)
KELCH repeat 553..596 CDD:276965 13/59 (22%)
Kelch 564..610 CDD:128874 8/42 (19%)
AT4G39590NP_568062.1 PHA03098 <33..297 CDD:222983 41/186 (22%)
KELCH repeat 137..184 CDD:276965 9/40 (23%)
KELCH repeat 188..233 CDD:276965 10/49 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.