DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT4G39240

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_195635.1 Gene:AT4G39240 / 830080 AraportID:AT4G39240 Length:375 Species:Arabidopsis thaliana


Alignment Length:369 Identity:74/369 - (20%)
Similarity:131/369 - (35%) Gaps:100/369 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 SLMSWVRHDSAAREQHIPELLALVRLPLLQPAFIMDHVENVCNAN--ECQ----QLVMEAFKW-- 299
            |.:|.:..:...::||.|.......|.||....|::     |.|.  :|.    .||.:.|:.  
plant     9 SSVSSIAEEPPPKKQHDPSPSCSSYLLLLPDEIILN-----CLARLPKCYYPVISLVSKTFRRLI 68

  Fly   300 ---HLMPERRSRIATERT-----------TPRKSTVGRLLAVGGMDAHKGAISIESYCPRLDKWT 350
               .:..||.....|||.           |||..|: .....|....:...:.|.|: |.:..| 
plant    69 ASPEIYVERSLLRRTERVLYVVLRSHATETPRWYTL-NFKPFGNDSNNHRLVPIPSF-PSIPCW- 130

  Fly   351 PWKHMTGRRLQFGAAV--MEDKLILVGGRDGLKTLNTVESLDLNTMAWAPLNAMATPRHGLGVAV 413
                        |.::  ::.::.::||....:.::|...::..:.....|.:|...|....|..
plant   131 ------------GMSIVAIDSEIYVLGGCIDNELVSTGFVVECPSHTCRLLPSMKQARGCAAVGF 183

  Fly   414 LEGPLYAVGGHDGWSYLNTVERWDPIARTWSYVAPMS-------SMRSTAGVAVLGGRLYAVGGR 471
            .:|.||.:||.:..| :|.||.:|...:||.....::       ::||.|    :..::|.:..:
plant   184 FDGKLYVIGGCNPLS-VNWVEAFDLKTQTWESGLGVNNVEMHDLTIRSFA----IDDKIYIMDRK 243

  Fly   472 DGSVCHRSIECYDPH----------TNKWSLLAPMNRRRGGVGVTVANGFLYALGGHDCPASNPM 526
            :..|       |||.          ..:||           ||..|.:|.:|..|..:       
plant   244 NSFV-------YDPKEGTLETDELLDTQWS-----------VGSCVIDGKIYTFGSKN------- 283

  Fly   527 VCRTETVERYDPATDTWTLICSLALGRDAIGCALLGDRLIVVGG 570
                 .:..:||....|..:    .|.|.:.....|.|:..:||
plant   284 -----RIWVFDPIAMVWDRL----KGLDDLPDKRDGSRMSNLGG 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 74/369 (20%)
BACK 179..281 CDD:285009 9/37 (24%)
Kelch 323..369 CDD:128874 6/47 (13%)
KELCH repeat 359..402 CDD:276965 5/44 (11%)
Kelch 370..416 CDD:128874 7/45 (16%)
KELCH repeat 406..449 CDD:276965 14/42 (33%)
Kelch 418..463 CDD:128874 14/51 (27%)
KELCH repeat 453..497 CDD:276965 10/53 (19%)
Kelch 464..510 CDD:128874 10/55 (18%)
Kelch_1 499..546 CDD:279660 9/46 (20%)
KELCH repeat 500..549 CDD:276965 9/48 (19%)
KELCH repeat 553..596 CDD:276965 5/18 (28%)
Kelch 564..610 CDD:128874 3/7 (43%)
AT4G39240NP_195635.1 F-box 34..79 CDD:279040 12/49 (24%)
Kelch_1 131..173 CDD:279660 5/41 (12%)
KELCH repeat 131..172 CDD:276965 5/40 (13%)
Kelch_1 175..215 CDD:279660 14/40 (35%)
KELCH repeat 176..224 CDD:276965 14/48 (29%)
KELCH repeat 264..298 CDD:276965 11/56 (20%)
Kelch_2 269..301 CDD:284956 7/47 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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