DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT4G38940

DIOPT Version :9

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_195605.1 Gene:AT4G38940 / 830049 AraportID:AT4G38940 Length:370 Species:Arabidopsis thaliana


Alignment Length:212 Identity:47/212 - (22%)
Similarity:71/212 - (33%) Gaps:46/212 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   405 PRHGLGVAVLEGPLYAVGGHDGWSYLNTVERWDPIARTWSYVAPMSSMRSTAGVAVLGGRLYAVG 469
            |.||..|.: ...::.:||...|...::|...|....|...:..|....:.....::..::|.:|
plant   120 PMHGSYVGI-GSNIFVMGGFCNWKITSSVSLIDCRTHTAQTLPNMPKAVAFPVTELIDRKIYVIG 183

  Fly   470 GRDG----SVCHRSIECYDPHTNKWSLLAPMNRRRG--GVGVTVANGFLYALGGHDCPASNPMVC 528
            |.|.    ....|.:..||..|..|.|.|..:...|  .....|..|.:|....|     |..||
plant   184 GSDTLSPMKSPSRIMMVYDTDTEMWQLRARPDWEAGKKWFSSVVIGGKIYMRTYH-----NSFVC 243

  Fly   529 RTETVERYDPATDTWTLICSLALGRDAI-------GCALLGDRLIVVGGYDGNHALKSVEEYDPV 586
                    || .||       :..||.:       ...::.|   |:..||...  ..:..|||.
plant   244 --------DP-NDT-------SCDRDEVLHSKEWWSACVIDD---VLYYYDVRE--NCLRAYDPK 287

  Fly   587 RNGW------NELAPMA 597
            :..|      ..|.|:|
plant   288 QRAWGVVKGFEGLLPVA 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 BTB 70..170 CDD:279045
PHA03098 71..591 CDD:222983 44/204 (22%)
BACK 179..281 CDD:285009
Kelch 323..369 CDD:128874
KELCH repeat 359..402 CDD:276965
Kelch 370..416 CDD:128874 4/10 (40%)
KELCH repeat 406..449 CDD:276965 9/42 (21%)
Kelch 418..463 CDD:128874 7/44 (16%)
KELCH repeat 453..497 CDD:276965 11/47 (23%)
Kelch 464..510 CDD:128874 13/51 (25%)
Kelch_1 499..546 CDD:279660 12/48 (25%)
KELCH repeat 500..549 CDD:276965 12/50 (24%)
KELCH repeat 553..596 CDD:276965 11/55 (20%)
Kelch 564..610 CDD:128874 10/40 (25%)
AT4G38940NP_195605.1 F-box 21..65 CDD:366220
KELCH repeat 123..164 CDD:276965 8/41 (20%)
Kelch_1 126..164 CDD:366584 7/38 (18%)
KELCH repeat 167..212 CDD:276965 10/44 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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