DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17754 and AT4G23580

DIOPT Version :10

Sequence 1:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_194089.1 Gene:AT4G23580 / 828458 AraportID:AT4G23580 Length:383 Species:Arabidopsis thaliana


Alignment Length:209 Identity:47/209 - (22%)
Similarity:73/209 - (34%) Gaps:38/209 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 GAAVMEDKLILVGG----------RDGLKTLNTVES---LDLNTMAWAPLNAMATPRHGLGVAVL 414
            |..|:...:..:||          ..|.||.|.:.|   ::..:..|....:|...|.......|
plant   113 GVVVVGPDVYAIGGGSKNKNVSIYATGSKTYNALSSVMIMNSRSHTWHEAPSMRVGRVFPSACTL 177

  Fly   415 EGPLYAVGGHDGWSYLNTVERWDPIARTWSYVAPMSSMRSTAGVAVLGGRLYAVGGRDGSVCHRS 479
            :|.:|..||.|....:|.:|.:|...:||.::...|.       .:..|..|......|:|..:|
plant   178 DGRIYVTGGCDNLDTMNWMEIFDTKTQTWEFLQIPSE-------EICKGSEYLSVSYQGTVYVKS 235

  Fly   480 IE---CYDPHTNKWSLLAPMNRRRGGVGVTVANGFLYALGGHDCPASNPM--VCRTETVERYDPA 539
            .|   .|..|..||.          ...:.:.||:..:.....|...|..  .|..| :..||..
plant   236 DEKDVTYKMHKGKWR----------EADICMNNGWSLSSSSSYCVVENVFYRYCEGE-IRWYDLK 289

  Fly   540 TDTWTLICSLALGR 553
            ...||::  ..|||
plant   290 NRAWTIL--KGLGR 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17754NP_572549.2 PHA03098 71..591 CDD:222983 47/209 (22%)
KELCH repeat 359..402 CDD:276965 10/51 (20%)
KELCH repeat 406..449 CDD:276965 12/42 (29%)
KELCH repeat 453..497 CDD:276965 10/46 (22%)
KELCH repeat 500..549 CDD:276965 10/50 (20%)
KELCH repeat 553..596 CDD:276965 1/1 (100%)
AT4G23580NP_194089.1 F-box_AtAFR-like 15..59 CDD:438923
PHA03098 <122..299 CDD:222983 42/196 (21%)
NanM <122..>207 CDD:442289 20/84 (24%)
KELCH repeat 169..209 CDD:276965 12/39 (31%)
Blue background indicates that the domain is not in the aligned region.

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