DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG17754 and AT3G63220

DIOPT Version :9

Sequence 1:	NP_572549.2	Gene:	CG17754 / 31873	FlyBaseID:	FBgn0030114	Length:	654	Species:	Drosophila melanogaster
Sequence 2:	NP_001326828.1	Gene:	AT3G63220 / 825497	AraportID:	AT3G63220	Length:	352	Species:	Arabidopsis thaliana

Alignment Length:	400	Identity:	90/400 - (22%)
Similarity:	137/400 - (34%)	Gaps:	131/400 - (32%)

- Green bases have known domain annotations that are detailed below.

  Fly   259 IPELLA---LVRLPL-LQPAFIMDHVENVCNANECQQLVMEAFKWHLMPERRSRIATERTTPRKS 319
            |||.:|   |..:|| |.|..               :||..:::..:......|:..|..:..
plant    15 IPEAVALRCLAHVPLHLHPNL---------------ELVSRSWRAAIRSHELFRVRKELRSSE-- 62

  Fly   320 TVGRLLAVGGMDAHKGAISIESYCPRLDKWTPWKHMTGR---RLQFGAAVMEDKLILVGGRDGLK 381
               .||.|...|...   ..:.|.|..|:|.....:..|   ...|||......|.::||
plant    63 ---HLLCVCAFDPEN---IWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGG----- 116

  Fly   382 TLNTVESLDLNTMAWAPLNAMATPRHGLGVAVLEGPLYAVGGHDG-------WSYLNTVERWDPI 439
                      .:.|.:|:                     .|.|||       |||       |.:
plant   117 ----------GSDAVSPV---------------------TGDHDGTFATDQVWSY-------DFV 143

  Fly   440 ARTWSYVAPMSSMRSTAGVAVLGGRLYAVGGRDGSVCHRSI---ECYDPHTNKWSLLAPMNRRRG 501
            .|.|:..|.|...|:.....||.|::...||  .:.|.:||   |.|||..:.|:.:..:::...
plant   144 QRQWTPRASMLVPRAMFACCVLQGKIVVAGG--FTTCRKSISGAEMYDPENDVWTSIPDLHQTHN 206

  Fly   502 GV--GVTVANGFLYALG--------------GHDCP----ASNPMVCRTETVER----------Y 536
            ..  |: |.||.::.|.              |.|..    ...|||    .||.          :
plant   207 SACSGL-VVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQGPMV----VVEDVLYVMSHGLVF 266

  Fly   537 DPATDTWTLICSLALGRDAIGCAL--LGDRLIVVGGYDG----NHALKSVEEYDPV-----RNGW 590
            ....|||.::.|.:..:..||.|:  |.|.:::|||..|    |..:|.:.:.|.:     |..|
plant   267 KQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPDRLNWDIKPLSDVDALTVGNDRPAW 331

  Fly   591 NELAPMAFAR 600
            ..:|||...|
plant   332 RSVAPMTRCR 341

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG17754	NP_572549.2	BTB	70..170	CDD:279045
		PHA03098	71..591	CDD:222983	85/389 (22%)
		BACK	179..281	CDD:285009	9/25 (36%)
		Kelch	323..369	CDD:128874	12/48 (25%)
		KELCH repeat	359..402	CDD:276965	8/42 (19%)
		Kelch	370..416	CDD:128874	5/45 (11%)
		KELCH repeat	406..449	CDD:276965	11/49 (22%)
		Kelch	418..463	CDD:128874	15/51 (29%)
		KELCH repeat	453..497	CDD:276965	14/46 (30%)
		Kelch	464..510	CDD:128874	12/50 (24%)
		Kelch_1	499..546	CDD:279660	15/76 (20%)
		KELCH repeat	500..549	CDD:276965	15/78 (19%)
		KELCH repeat	553..596	CDD:276965	15/53 (28%)
		Kelch	564..610	CDD:128874	12/45 (27%)
AT3G63220	NP_001326828.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	57	1.000	Inparanoid score	I2576
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X9
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.960